RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Lrrc4bP0C192 709 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ccdc102aQ3TMW1 549 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 BC051142Q3V0M8 400 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Tp53i13Q5F267 385 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Cep112Q5PR68 954 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Phlda1Q62392 405 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Sass6Q80UK7 654 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Phka2Q8BWJ3 1235 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Slc13a4Q8BZ82 625 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Stxbp5Q8K400 1152 aaKnown RBP13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Olfr1499Q8VG65 314 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Rrp1bQ91YK2 724 aaKnown RBP13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gimap3Q99MI6 301 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gtf2a1Q99PM3 378 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Rab27aQ9ERI2 221 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Adam22Q9R1V6 904 aa13.14□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Col5a3Q9JLI2 1739 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Prdm12A2AJ77 365 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ptchd4B9EKX1 904 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 ZfxP17012 799 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 FechP22315 420 aaKnown RBP13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gna15P30678 374 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Spink5Q148R4 1017 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gm5935Q497S0 212 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zbtb8osQ505B7 168 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Frmd5Q6P5H6 517 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Papd7Q6PB75 542 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Snd1Q78PY7 910 aaKnown RBP13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Agbl2Q8CDK2 862 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Dmtf1Q8CE22 761 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gnl3Q8CI11 538 aaKnown RBP13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Kct2Q8K201 259 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Il17cQ8K4C5 194 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Scrn2Q8VCA8 425 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Asb7Q91ZU0 318 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Asb11Q9CQ31 323 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Spata17Q9D552 379 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Rab11fip1Q9D620 645 aa13.13□□□□□ -0.31
Ldb3-203ENSMUST00000022330 1700017N19RikA0A087WPJ1 469 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gucy2dA0A0U1RPR8 1117 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zscan4-ps3A0A1B0GRH6 506 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Slc6a21A0A1B0GSD2 748 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zscan4-ps2A0A1C7CYU6 506 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ptpn3A2ALK8 913 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Slc16a6B1AT66 607 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Gm8909G3UXE9 396 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Guca2bO09051 106 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Mmp3P28862 477 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Nub1P54729 614 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Tcp11Q01755 566 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Uri1Q3TLD5 531 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Mfhas1Q3V1N1 1048 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Kcnt1Q6ZPR4 1224 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zfp397Q7TNK4 527 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Snx17Q8BVL3 470 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Fam160b1Q8CDM8 764 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Phc3Q8CHP6 981 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Pqbp1Q91VJ5 263 aaKnown RBP13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ankrd54Q91WK7 299 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ces1fQ91WU0 561 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Arfgap2Q99K28 520 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zfyve19Q9DAZ9 389 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Trpc3Q9QZC1 836 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 EmcnQ9R0H2 261 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Eif2ak3Q9Z2B5 1114 aa13.12□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Btbd18A0A0A6YY25 723 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ttc17E9PVB5 1198 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Pja1O55176 578 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Xirp1O70373 1129 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Pdia4P08003 638 aaKnown RBP13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Oaz1P54369 227 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Vamp7P70280 220 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Grm2Q14BI2 872 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Hace1Q3U0D9 909 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ccdc85aQ5SP85 500 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Myl6Q60605 151 aaKnown RBP13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Vps72Q62481 368 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Tlr11Q6R5P0 926 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 PhkbQ7TSH2 1085 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Znf12Q7TSI0 686 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Tmco3Q8BH01 678 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Prl7b1Q8CGZ9 251 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Sash3Q8K352 380 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Socs4Q91ZA6 436 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Sar1bQ9CQC9 198 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ctnnbl1Q9CWL8 563 aaKnown RBP13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 VasnQ9CZT5 673 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Slc26a3Q9WVC8 757 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Cdk14O35495 469 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Xrcc5P27641 732 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Cd86P42082 309 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 TdgP56581 421 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 SPINDOCQ05AH6 381 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Krt35Q497I4 455 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 RetsatQ64FW2 609 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Ncoa7Q6DFV7 943 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Skiv2lQ6NZR5 1244 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Zfp251Q6PCX8 632 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Krit1Q6S5J6 736 aa13.11□□□□□ -0.31
Ldb3-203ENSMUST00000022330 Cog3Q8CI04 820 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms