RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 NfkbiaQ9Z1E3 314 aa12.85□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Sgo2bJ3QMK1 1167 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ptpn5P54830 541 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Actr2P61161 394 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Atp13a5Q3TYU2 1216 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cep44Q5HZK1 386 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ddhd1Q80YA3 547 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Vcpip1Q8CDG3 1220 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pphln1Q8K2H1 381 aaKnown RBP12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 XpotQ9CRT8 963 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Nme3Q9WV85 169 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Scaf11E9PZM7 1456 aaKnown RBP12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 C2P21180 760 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ppp4r3cQ3V0Y1 813 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Atp2b4Q6Q477 1205 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pcmtd2Q8BHD8 359 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gcfc2Q8BKT3 769 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Fam118bQ8C569 351 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Lgi2Q8K4Z0 550 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Iqsec1Q8R0S2 961 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Emilin1Q99K41 1017 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ppp2r3cQ9JK24 453 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cpsf3Q9QXK7 684 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Rnf103Q9R1W3 683 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm4340L7N2C4 268 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pex5O09012 639 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ctdnep1Q3TP92 244 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Kctd1Q5M956 257 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cyp4x1Q6A152 507 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Phf21aQ6ZPK0 659 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ip6k2Q80V72 448 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Trim65Q8BFW4 522 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Znf879Q8BI99 563 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Klhl11Q8CE33 709 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Eps8l2Q99K30 729 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 DiabloQ9JIQ3 237 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Kiaa1107Q80TK0 1369 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Adcy1O88444 1118 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gabpb1Q00420 383 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Foxn3Q499D0 457 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Adad1Q5SUE7 619 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 HomezQ80W88 542 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Usp6nlQ80XC3 819 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Utp6Q8VCY6 597 aaKnown RBP12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Msi2Q920Q6 346 aaKnown RBP12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Terb2Q9D494 218 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tuba8Q9JJZ2 449 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 CdylQ9WTK2 593 aa12.84□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Slc9a5B2RXE2 898 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm8267E9Q207 261 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Hcn2O88703 863 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Dynll1P63168 89 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Fam20cQ5MJS3 579 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Utp14bQ6EJB6 756 aaKnown RBP12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 RimklbQ80WS1 387 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Nsl1Q8K305 281 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Mospd1Q8VEL0 213 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Trap1Q9CQN1 706 aaKnown RBP12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pdzd9Q9D9M4 266 aa12.83□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Dthd1E9PZX1 795 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Aoc3O70423 765 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Lmnb1P14733 588 aaKnown RBP12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 RalgdsQ03385 852 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Calb2Q08331 271 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Pla2g4cQ64GA5 597 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Lrrn2Q6PHP6 730 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 AarsQ8BGQ7 968 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Pgs1Q8BHF7 553 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Pex5lQ8C437 567 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Cyp3a57D3YYZ0 503 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Ube4aE9Q735 1028 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Dnajb6O54946 365 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Serpinb2P12388 415 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Coq8aQ60936 645 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Q80Y73 168 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 ChfrQ810L3 664 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Cnot3Q8K0V4 751 aaKnown RBP12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 MydgfQ9CPT4 166 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Thumpd2Q9CZB3 528 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Nfu1Q9QZ23 255 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Phf2Q9WTU0 1096 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Ugt1a8D3Z748 530 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Ugt1a10E9PXN7 530 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Pde8bE9Q4S1 865 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Sept1P42209 366 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Cfap206Q6PE87 622 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Ttll4Q80UG8 1193 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Fam53cQ8BXQ8 393 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Spire2Q8K1S6 718 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Emilin2Q8K482 1074 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Nrbp2Q91V36 499 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Mageb16Q9CWV4 363 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 AnkarA2RT91 1465 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Pagr1bF6V0H0 108 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Speer4cG3UXD1 256 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Kbtbd2G3X9X1 623 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Gm10354K7N6A0 256 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Stat5bP42232 786 aa12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Erp29P57759 262 aaKnown RBP12.83□□□□□ -0.36
Pcdhac1-201ENSMUST00000007584 Eif3eP60229 445 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms