RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Nr1h3Q9Z0Y9 445 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gm379J3QQ19 296 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rnaseh1O70338 285 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Orc4O88708 433 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 AfmO89020 608 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zfy1P10925 782 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Klrb1Q0ZUP1 214 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 9130409I23RikQ3TS87 320 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 TraddQ3U0V2 310 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 R3hdm2Q80TM6 1044 aaKnown RBP13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zbtb44Q8R0A2 453 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Znrd1-asQ8R0E5 213 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pcdhb2Q91Y00 799 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Dqx1Q924H9 718 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ppp1r3aQ99MR9 1089 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 YwhabQ9CQV8 246 aaKnown RBP13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Smok2bQ9QYZ3 484 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Smok2aQ9QYZ6 504 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zc3h13E9Q784 1729 aaKnown RBP13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Mroh7A2AVR2 1279 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gm20721E9Q2U8 318 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Myl2P51667 166 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 PctpP53808 214 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rgs9bpQ148R9 237 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Upf3bQ3ULL6 472 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Lrig3Q6P1C6 1117 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tas2r109Q7M707 316 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Kbtbd3Q8BHI4 607 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Nemp2Q8CB65 421 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gtpbp10Q8K013 366 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Foxp3Q99JB6 429 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pdxdc1Q99K01 787 aaKnown RBP13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Polr3cQ9D483 533 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Abcg8Q9DBM0 673 aa13.42□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ptpn23Q6PB44 1692 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gm5814J3QP80 125 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slc1a1P51906 523 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gpr101Q80T62 511 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rusc1Q8BG26 893 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Trmt2aQ8BNV1 574 aaKnown RBP13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rapgef5Q8C0Q9 814 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slc9b1Q8C0X2 565 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pnpt1Q8K1R3 783 aaKnown RBP13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Olfr390Q8VEZ7 311 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Mrfap1Q9CQL7 125 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ears2Q9CXJ1 523 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Nsmce1Q9D720 266 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ric1Q69ZJ7 1422 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 InhbeO08717 350 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Marcksl1P28667 200 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 YwhaeP62259 255 aaKnown RBP13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Etv6P97360 485 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Atxn2lQ7TQH0 1049 aaKnown RBP13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 NrcamQ810U4 1256 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gpr180Q8BPS4 441 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slc4a7Q8BTY2 1034 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Cdk5rap3Q99LM2 503 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 PapolbQ9WVP6 641 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Speer3W4VSP1 261 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Magea10A2AMW4 325 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pde8aO88502 823 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Kcnj11Q61743 390 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Adgrg6Q6F3F9 1165 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tmc4Q7TQ65 694 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gramd1bQ80TI0 738 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pnma1Q8C1C8 353 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Dnm1lQ8K1M6 742 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 HyiQ8R1F5 277 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Cdk9Q99J95 372 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Strn3Q9ERG2 796 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Bnip3lQ9Z2F7 218 aa13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ahnak2E9PYB0 1738 aaKnown RBP13.41□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slc6a16A0A1L1SR47 742 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rabgap1lA6H6A9 815 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Chrna9G3X8Z7 479 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Cyp2j6O54750 501 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pim2Q62070 370 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Nr2e1Q64104 385 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tbc1d10cQ8C9V1 444 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Cabcoco1Q8CDT7 208 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Kiaa0319lQ8K135 1048 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Stxbp5Q8K400 1152 aaKnown RBP13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tgif2lx2Q8K5B9 231 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Nudcd3Q8R1N4 363 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ttc8Q8VD72 515 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ccdc65Q8VHI7 493 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 MlklQ9D2Y4 472 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tgm5Q9D7I9 724 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slc22a3Q9WTW5 551 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Fem1bQ9Z2G0 627 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ccdc85cE9Q6B2 420 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Vmn2r77L7N2B7 854 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 EsrraO08580 422 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Epha3P29319 983 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Mysm1Q69Z66 819 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 RimklbQ80WS1 387 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tmem145Q8C4U2 746 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 NptxrQ99J85 493 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Smyd3Q9CWR2 428 aa13.4□□□□□ -0.26
Msh6-201ENSMUST00000005503 Drc3Q9D5E4 523 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms