RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT1	YMR200W	MCT1	Q12283	360 aa		4.14	□□□□□ -1.75
ROT1	YMR200W	FOL3	Q12676	427 aa	Predicted RBP	4.14	□□□□□ -1.75
ROT1	YMR200W	YAL064W-B	O13512	126 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	COX5A	P00424	153 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	PET54	P10834	293 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	PET8	P38921	284 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	PEX22	P39718	180 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	EDC3	P39998	551 aa	Known RBP	4.13	□□□□□ -1.75
ROT1	YMR200W	YER076C	P40049	302 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	YIL152W	P40455	235 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	GUF1	P46943	645 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	NBP35	P52920	328 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	JAC1	P53193	184 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	CWC25	P53854	179 aa	Known RBP	4.13	□□□□□ -1.75
ROT1	YMR200W	SCS7	Q03529	384 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	SPC24	Q04477	213 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	COQ10	Q08058	207 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	SRL1	Q08673	210 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	RFM1	Q12192	310 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	YGK3	Q12222	375 aa	Predicted RBP	4.13	□□□□□ -1.75
ROT1	YMR200W	EAF3	Q12432	401 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	AGC1	Q12482	902 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	HTZ1	Q12692	134 aa	Known RBP	4.13	□□□□□ -1.75
ROT1	YMR200W	BI3	Q9ZZW7	517 aa		4.13	□□□□□ -1.75
ROT1	YMR200W	HEM4	P06174	275 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	RPS14A	P06367	137 aa	Known RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	MRPL20	P22354	195 aa	Predicted RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	YCR022C	P25620	114 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	TAH1	P25638	111 aa	Predicted RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
ROT1	YMR200W	MRPL28	P36527	147 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	MRP21	P38175	177 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	YBR137W	P38276	179 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	MED8	P38304	223 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	RPS14B	P39516	138 aa	Known RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	YIL029C	P40538	142 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	CIN5	P40917	295 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	AZF1	P41696	914 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	LCB3	P47013	409 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	MCM22	P47167	239 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	YMR279C	Q03263	540 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	TDA1	Q03533	586 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	YML018C	Q03730	393 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	YMR315W	Q04869	349 aa	Known RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	YLR036C	Q07986	203 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	YOR283W	Q12040	230 aa	Known RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	YLR050C	Q12155	161 aa	Known RBP	4.12	□□□□□ -1.75
ROT1	YMR200W	MRX4	Q12467	430 aa		4.12	□□□□□ -1.75
ROT1	YMR200W	SCO2	P38072	301 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
ROT1	YMR200W	ECM33	P38248	429 aa	Known RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	MDM31	P38880	579 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	YMR144W	P40214	342 aa	Known RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	OST1	P41543	476 aa	Known RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	CPR7	P47103	393 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	VMA10	P48836	114 aa	Known RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	NRM1	P53718	249 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	SUR7	P54003	302 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	YDR415C	Q04033	374 aa	Predicted RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	UTP15	Q04305	513 aa	Known RBP	4.11	□□□□□ -1.75
ROT1	YMR200W	SPG4	Q04438	115 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	SEI1	Q06058	285 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	YPR127W	Q06494	345 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	ATX2	Q12067	313 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	FCY22	Q12119	530 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	YDL199C	Q12407	687 aa		4.11	□□□□□ -1.75
ROT1	YMR200W	CDC28	P00546	298 aa	Known RBP	4.1	□□□□□ -1.75
ROT1	YMR200W	YKR104W	P0CE69	306 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	TRX3	P25372	127 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	MGT1	P26188	188 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	AEP1	P32493	518 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	CLG1	P35190	452 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	UPS2	P35200	230 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	YKR041W	P36134	250 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	YBR062C	P38239	180 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	HEM14	P40012	539 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	COS4	P43542	379 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	MOB2	P43563	287 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	IKS1	P47042	667 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	YJR054W	P47114	497 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	BXI1	P48558	297 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	TOS8	P53147	276 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	COG7	P53195	279 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	ARO80	Q04052	950 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	YPR091C	Q06833	770 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	YLR031W	Q07978	186 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	ERV2	Q12284	196 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	IGO2	Q9P305	131 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	MHP1	P43638	1398 aa		4.1	□□□□□ -1.75
ROT1	YMR200W	MET2	P08465	486 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	RPL4A	P10664	362 aa	Known RBP	4.09	□□□□□ -1.75
ROT1	YMR200W	GCN3	P14741	305 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	SEC22	P22214	214 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	YCR043C	P25361	127 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	TIP20	P33891	701 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	SRY1	P36007	326 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	PAN6	P40459	309 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	MOG1	P47123	218 aa		4.09	□□□□□ -1.75
ROT1	YMR200W	RPL4B	P49626	362 aa	Known RBP	4.09	□□□□□ -1.75
ROT1	YMR200W	SYF2	P53277	215 aa	Predicted RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms