RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A RAD9P14737 1309 aa2.31□□□□□ -2.04
SFT1YKL006C-A YAL064W-BO13512 126 aa2.3□□□□□ -2.04
SFT1YKL006C-A YCR025CP25352 136 aa2.3□□□□□ -2.04
SFT1YKL006C-A ALK2P32789 676 aaPredicted RBP2.3□□□□□ -2.04
SFT1YKL006C-A CDC13P32797 924 aaKnown RBP2.3□□□□□ -2.04
SFT1YKL006C-A PRX1P34227 261 aaKnown RBP2.3□□□□□ -2.04
SFT1YKL006C-A YKL075CP36083 450 aa2.3□□□□□ -2.04
SFT1YKL006C-A ECM4P36156 370 aa2.3□□□□□ -2.04
SFT1YKL006C-A MBA1P38300 278 aa2.3□□□□□ -2.04
SFT1YKL006C-A MED8P38304 223 aa2.3□□□□□ -2.04
SFT1YKL006C-A MIC26P50087 233 aa2.3□□□□□ -2.04
SFT1YKL006C-A MGA1P53050 456 aa2.3□□□□□ -2.04
SFT1YKL006C-A RMR1P53060 241 aa2.3□□□□□ -2.04
SFT1YKL006C-A SDS23P53172 527 aa2.3□□□□□ -2.04
SFT1YKL006C-A NOP19P53317 196 aaPredicted RBP2.3□□□□□ -2.04
SFT1YKL006C-A YMR166CQ03829 368 aa2.3□□□□□ -2.04
SFT1YKL006C-A MMT2Q08970 484 aa2.3□□□□□ -2.04
SFT1YKL006C-A SRO7Q12038 1033 aa2.3□□□□□ -2.04
SFT1YKL006C-A TIR4Q12218 487 aaPredicted RBP2.3□□□□□ -2.04
SFT1YKL006C-A HTB1P02293 131 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A HTB2P02294 131 aa2.29□□□□□ -2.04
SFT1YKL006C-A CDC10P25342 322 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A RFA3P26755 122 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A TPS2P31688 896 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A NTF2P33331 125 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A ECM34P38728 170 aa2.29□□□□□ -2.04
SFT1YKL006C-A GOS1P38736 223 aa2.29□□□□□ -2.04
SFT1YKL006C-A ADO1P47143 340 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A NIF3P53081 288 aa2.29□□□□□ -2.04
SFT1YKL006C-A YGR067CP53243 804 aa2.29□□□□□ -2.04
SFT1YKL006C-A SDC1Q03323 175 aa2.29□□□□□ -2.04
SFT1YKL006C-A YMR114CQ04471 368 aaKnown RBP2.29□□□□□ -2.04
SFT1YKL006C-A YPR098CQ06089 161 aa2.29□□□□□ -2.04
SFT1YKL006C-A YOR292CQ08743 309 aa2.29□□□□□ -2.04
SFT1YKL006C-A VIK1Q12045 647 aa2.29□□□□□ -2.04
SFT1YKL006C-A AI5_BETAQ9ZZX0 354 aa2.29□□□□□ -2.04
SFT1YKL006C-A SIR4P11978 1358 aa2.28□□□□□ -2.04
SFT1YKL006C-A QCR7P00128 127 aa2.28□□□□□ -2.04
SFT1YKL006C-A RPL27AP0C2H6 136 aaKnown RBP2.28□□□□□ -2.04
SFT1YKL006C-A RPL27BP0C2H7 136 aaKnown RBP2.28□□□□□ -2.04
SFT1YKL006C-A KSS1P14681 368 aa2.28□□□□□ -2.04
SFT1YKL006C-A BGL2P15703 313 aaKnown RBP2.28□□□□□ -2.04
SFT1YKL006C-A EPT1P22140 391 aa2.28□□□□□ -2.04
SFT1YKL006C-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SFT1YKL006C-A FRM2P37261 193 aa2.28□□□□□ -2.04
SFT1YKL006C-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SFT1YKL006C-A CUE1P38428 203 aa2.28□□□□□ -2.04
SFT1YKL006C-A GET1P53192 235 aa2.28□□□□□ -2.04
SFT1YKL006C-A RNH201P53942 307 aa2.28□□□□□ -2.04
SFT1YKL006C-A RHO3Q00245 231 aaKnown RBP2.28□□□□□ -2.04
SFT1YKL006C-A YDR222WQ04925 415 aa2.28□□□□□ -2.04
SFT1YKL006C-A ARC18Q05933 178 aaKnown RBP2.28□□□□□ -2.04
SFT1YKL006C-A YPR195CQ06594 109 aa2.28□□□□□ -2.04
SFT1YKL006C-A COQ10Q08058 207 aa2.28□□□□□ -2.04
SFT1YKL006C-A RFM1Q12192 310 aa2.28□□□□□ -2.04
SFT1YKL006C-A SNU23Q12368 194 aaPredicted RBP2.28□□□□□ -2.04
SFT1YKL006C-A DCN1Q12395 269 aa2.28□□□□□ -2.04
SFT1YKL006C-A CMC2Q3E7A4 109 aa2.28□□□□□ -2.04
SFT1YKL006C-A SPS19P32573 292 aaKnown RBP2.27□□□□□ -2.05
SFT1YKL006C-A SMP1P38128 452 aa2.27□□□□□ -2.05
SFT1YKL006C-A FZO1P38297 855 aa2.27□□□□□ -2.05
SFT1YKL006C-A IKI1P38874 309 aa2.27□□□□□ -2.05
SFT1YKL006C-A EGD2P38879 174 aaKnown RBP2.27□□□□□ -2.05
SFT1YKL006C-A SEN34P39707 275 aa2.27□□□□□ -2.05
SFT1YKL006C-A PRE6P40303 254 aaKnown RBP2.27□□□□□ -2.05
SFT1YKL006C-A AVT7P40501 490 aa2.27□□□□□ -2.05
SFT1YKL006C-A STB1P42845 420 aa2.27□□□□□ -2.05
SFT1YKL006C-A COQ5P49017 307 aa2.27□□□□□ -2.05
SFT1YKL006C-A NSA1P53136 463 aaPredicted RBP2.27□□□□□ -2.05
SFT1YKL006C-A ALG13P53178 202 aa2.27□□□□□ -2.05
SFT1YKL006C-A ATG17Q06410 417 aa2.27□□□□□ -2.05
SFT1YKL006C-A YDR018CQ12185 396 aa2.27□□□□□ -2.05
SFT1YKL006C-A YLR126CQ12288 251 aa2.27□□□□□ -2.05
SFT1YKL006C-A JLP1Q12358 412 aa2.27□□□□□ -2.05
SFT1YKL006C-A TUS1Q06412 1307 aa2.26□□□□□ -2.05
SFT1YKL006C-A IKI3Q06706 1349 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A YMR316C-AI2HB70 103 aa2.26□□□□□ -2.05
SFT1YKL006C-A RPL28P02406 149 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A BCY1P07278 416 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A YKR104WP0CE69 306 aa2.26□□□□□ -2.05
SFT1YKL006C-A RPL4AP10664 362 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A ATP7P30902 174 aa2.26□□□□□ -2.05
SFT1YKL006C-A GDH2P33327 1092 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A SGE1P33335 543 aa2.26□□□□□ -2.05
SFT1YKL006C-A YHL049CP38722 271 aa2.26□□□□□ -2.05
SFT1YKL006C-A EFM1P38732 585 aa2.26□□□□□ -2.05
SFT1YKL006C-A YHR127WP38833 243 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A FRT2P39734 528 aa2.26□□□□□ -2.05
SFT1YKL006C-A YIL012WP40551 113 aa2.26□□□□□ -2.05
SFT1YKL006C-A YIR035CP40579 254 aa2.26□□□□□ -2.05
SFT1YKL006C-A CPR7P47103 393 aa2.26□□□□□ -2.05
SFT1YKL006C-A YJR149WP47177 404 aa2.26□□□□□ -2.05
SFT1YKL006C-A RPL4BP49626 362 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A TRM9P49957 279 aa2.26□□□□□ -2.05
SFT1YKL006C-A COG7P53195 279 aa2.26□□□□□ -2.05
SFT1YKL006C-A FMP41P53889 259 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A DIA1P54005 336 aa2.26□□□□□ -2.05
SFT1YKL006C-A RMI1Q02685 241 aa2.26□□□□□ -2.05
SFT1YKL006C-A YPL113CQ02961 396 aa2.26□□□□□ -2.05
SFT1YKL006C-A MRX11Q03079 207 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms