RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W MET30P39014 640 aa5.6□□□□□ -1.51
SNU71YGR013W RPS14BP39516 138 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W NIF3P53081 288 aa5.6□□□□□ -1.51
SNU71YGR013W GET1P53192 235 aa5.6□□□□□ -1.51
SNU71YGR013W SKI8Q02793 397 aaPredicted RBP5.6□□□□□ -1.51
SNU71YGR013W YPR091CQ06833 770 aa5.6□□□□□ -1.51
SNU71YGR013W MRX9Q07349 420 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W PRM4Q12498 284 aa5.6□□□□□ -1.51
SNU71YGR013W RPL35AP0CX84 120 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W RPL35BP0CX85 120 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W CKA2P19454 339 aa5.6□□□□□ -1.51
SNU71YGR013W INO2P26798 304 aa5.6□□□□□ -1.51
SNU71YGR013W RPC19P28000 142 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W FUN26P31381 517 aa5.6□□□□□ -1.51
SNU71YGR013W YBP1P38315 674 aa5.6□□□□□ -1.51
SNU71YGR013W PET8P38921 284 aa5.6□□□□□ -1.51
SNU71YGR013W RPR2P40571 144 aa5.6□□□□□ -1.51
SNU71YGR013W USE1P53146 245 aa5.6□□□□□ -1.51
SNU71YGR013W RNY1Q02933 434 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W YLR446WQ06204 433 aa5.6□□□□□ -1.51
SNU71YGR013W MHR1Q06630 226 aa5.6□□□□□ -1.51
SNU71YGR013W YCT1Q12235 531 aa5.6□□□□□ -1.51
SNU71YGR013W ISY1P21374 235 aaPredicted RBP5.59□□□□□ -1.51
SNU71YGR013W PMT2P31382 759 aa5.59□□□□□ -1.51
SNU71YGR013W GDH2P33327 1092 aaKnown RBP5.59□□□□□ -1.51
SNU71YGR013W UTP11P34247 250 aaPredicted RBP5.59□□□□□ -1.51
SNU71YGR013W IBA57P47158 497 aa5.59□□□□□ -1.51
SNU71YGR013W TPN1P53099 579 aa5.59□□□□□ -1.51
SNU71YGR013W CTF19Q02732 369 aa5.59□□□□□ -1.51
SNU71YGR013W DIG1Q03063 452 aaKnown RBP5.59□□□□□ -1.51
SNU71YGR013W PEX30Q06169 523 aa5.59□□□□□ -1.51
SNU71YGR013W ATG17Q06410 417 aa5.59□□□□□ -1.51
SNU71YGR013W YDL114WQ07530 308 aa5.59□□□□□ -1.51
SNU71YGR013W YGK3Q12222 375 aaPredicted RBP5.59□□□□□ -1.51
SNU71YGR013W KTI12P34253 313 aaKnown RBP5.58□□□□□ -1.52
SNU71YGR013W STB1P42845 420 aa5.58□□□□□ -1.52
SNU71YGR013W YPS5P53057 165 aa5.58□□□□□ -1.52
SNU71YGR013W ASI3P53983 676 aa5.58□□□□□ -1.52
SNU71YGR013W RSA1Q08932 381 aa5.58□□□□□ -1.52
SNU71YGR013W YOR114WQ12219 294 aa5.58□□□□□ -1.52
SNU71YGR013W YDL199CQ12407 687 aa5.58□□□□□ -1.52
SNU71YGR013W RPS18AP0CX55 146 aaKnown RBP5.58□□□□□ -1.52
SNU71YGR013W RPS18BP0CX56 146 aaPredicted RBP5.58□□□□□ -1.52
SNU71YGR013W NMT1P14743 455 aa5.58□□□□□ -1.52
SNU71YGR013W EHD3P28817 500 aa5.58□□□□□ -1.52
SNU71YGR013W CPR5P35176 225 aa5.58□□□□□ -1.52
SNU71YGR013W YBR096WP38256 230 aa5.58□□□□□ -1.52
SNU71YGR013W FZO1P38297 855 aa5.58□□□□□ -1.52
SNU71YGR013W DPP1Q05521 289 aa5.58□□□□□ -1.52
SNU71YGR013W GPM2Q12008 311 aa5.58□□□□□ -1.52
SNU71YGR013W ATP16Q12165 160 aa5.58□□□□□ -1.52
SNU71YGR013W RPL15AP05748 204 aaKnown RBP5.57□□□□□ -1.52
SNU71YGR013W PRX1P34227 261 aaKnown RBP5.57□□□□□ -1.52
SNU71YGR013W JEN1P36035 616 aa5.57□□□□□ -1.52
SNU71YGR013W PEX22P39718 180 aa5.57□□□□□ -1.52
SNU71YGR013W NCA3P46955 337 aa5.57□□□□□ -1.52
SNU71YGR013W RBL2P48606 106 aaKnown RBP5.57□□□□□ -1.52
SNU71YGR013W MGA1P53050 456 aa5.57□□□□□ -1.52
SNU71YGR013W MFG1Q07684 458 aa5.57□□□□□ -1.52
SNU71YGR013W CUE1P38428 203 aa5.56□□□□□ -1.52
SNU71YGR013W NDT80P38830 627 aa5.56□□□□□ -1.52
SNU71YGR013W IKI1P38874 309 aa5.56□□□□□ -1.52
SNU71YGR013W AGE2P40529 298 aa5.56□□□□□ -1.52
SNU71YGR013W GMC1Q04399 608 aa5.56□□□□□ -1.52
SNU71YGR013W YMR114CQ04471 368 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W ERP1Q05359 219 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W INM2Q05533 292 aa5.56□□□□□ -1.52
SNU71YGR013W ARC18Q05933 178 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W TRP1P00912 224 aa5.56□□□□□ -1.52
SNU71YGR013W TPI1P00942 248 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W MIR1P23641 311 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W AST1P35183 429 aa5.56□□□□□ -1.52
SNU71YGR013W HEM14P40012 539 aa5.56□□□□□ -1.52
SNU71YGR013W PCI8P40512 444 aa5.56□□□□□ -1.52
SNU71YGR013W MAM33P40513 266 aa5.56□□□□□ -1.52
SNU71YGR013W ADO1P47143 340 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W VMA10P48836 114 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W SWS2P53937 143 aa5.56□□□□□ -1.52
SNU71YGR013W YMR010WQ03687 405 aa5.56□□□□□ -1.52
SNU71YGR013W YMR166CQ03829 368 aa5.56□□□□□ -1.52
SNU71YGR013W YHC1Q05900 231 aaKnown RBP5.56□□□□□ -1.52
SNU71YGR013W CMK2P22517 447 aa5.55□□□□□ -1.52
SNU71YGR013W NTF2P33331 125 aaKnown RBP5.55□□□□□ -1.52
SNU71YGR013W YBR062CP38239 180 aa5.55□□□□□ -1.52
SNU71YGR013W POP7P38291 140 aa5.55□□□□□ -1.52
SNU71YGR013W RCK1P38622 512 aa5.55□□□□□ -1.52
SNU71YGR013W YIL152WP40455 235 aa5.55□□□□□ -1.52
SNU71YGR013W SER33P40510 469 aa5.55□□□□□ -1.52
SNU71YGR013W MOB2P43563 287 aa5.55□□□□□ -1.52
SNU71YGR013W MIC26P50087 233 aa5.55□□□□□ -1.52
SNU71YGR013W ALG13P53178 202 aa5.55□□□□□ -1.52
SNU71YGR013W TPC1P53257 314 aa5.55□□□□□ -1.52
SNU71YGR013W SPC2Q04969 178 aa5.55□□□□□ -1.52
SNU71YGR013W CPR1P14832 162 aaKnown RBP5.54□□□□□ -1.52
SNU71YGR013W SNF6P18888 332 aa5.54□□□□□ -1.52
SNU71YGR013W DBF2P22204 572 aa5.54□□□□□ -1.52
SNU71YGR013W YPT52P36018 234 aaKnown RBP5.54□□□□□ -1.52
SNU71YGR013W EDC3P39998 551 aaKnown RBP5.54□□□□□ -1.52
SNU71YGR013W YER137CP40083 148 aaKnown RBP5.54□□□□□ -1.52
SNU71YGR013W NBP35P52920 328 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms