RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	NAS2	P40555	220 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	CAT5	P41735	233 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	POP1	P41812	875 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	SGF73	P53165	657 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YGR117C	P53270	476 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	MSC2	Q03455	724 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	CRF1	Q04930	467 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	FSF1	Q12029	327 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	PIN2	Q12057	282 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YCR075W-A	Q3E830	75 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	TPI1	P00942	248 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	HAP4	P14064	554 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	NOP1	P15646	327 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	PDA1	P16387	420 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	SLM5	P25345	492 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
DBF4	YDR052C	OAC1	P32332	324 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	ERG3	P32353	365 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	AAR2	P32357	355 aa	Predicted RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	ARO9	P38840	513 aa	Predicted RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	OSW5	P40219	148 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	SEC24	P40482	926 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	TPS1	Q00764	495 aa	Known RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	CNL1	Q06333	122 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	FCF2	Q12035	217 aa	Predicted RBP	4.77	□□□□□ -1.65
DBF4	YDR052C	BTS1	Q12051	335 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	SLM3	Q12093	417 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	FRE8	Q12209	686 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	YLR361C-A	Q3E795	98 aa		4.77	□□□□□ -1.65
DBF4	YDR052C	MSW1	P04803	379 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	RPS31	P05759	152 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	UBI4	P0CG63	381 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	RPS4A	P0CX35	261 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	RPS4B	P0CX36	261 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	HOG1	P32485	435 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	PHD1	P36093	366 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	RIB5	P38145	238 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	YER121W	P40076	114 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	ULI1	P43604	169 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	BIT61	P47041	543 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	CDC14	Q00684	551 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	YML053C	Q04978	212 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	ERP1	Q05359	219 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	TY1A-NL1	Q12391	440 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	PDH1	Q12428	516 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	YLR099W-A	Q3E798	87 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	ILV5	P06168	395 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	RPL40A	P0CH08	128 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	RPL40B	P0CH09	128 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	FEN2	P25621	512 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	YIH1	P25637	258 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	UTR5	P32630	166 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	LOT5	P34234	306 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	YIL060W	P40519	144 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	FKH2	P41813	862 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	MAF1	P41910	395 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	MTR3	P48240	250 aa	Predicted RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	BNS1	P50084	137 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	THG1	P53215	237 aa	Known RBP	4.76	□□□□□ -1.65
DBF4	YDR052C	EST3	Q03096	181 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	ROY1	Q04847	553 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	IRC10	Q08118	586 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	UBX3	Q12229	455 aa		4.76	□□□□□ -1.65
DBF4	YDR052C	YFL068W	P0CX99	160 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YLL066W-A	P0CY00	160 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YLL067W-A	P0CY01	160 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	BGL2	P15703	313 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	PBN1	P25580	416 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	GEX1	P25596	615 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	POP5	P28005	173 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	SRB5	P32585	307 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	RML2	P32611	393 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	SPT23	P35210	1082 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	PTK1	P36002	662 aa	Predicted RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	CUE1	P38428	203 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	SHO1	P40073	367 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YJL132W	P47014	750 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	MIC26	P50087	233 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	NIF3	P53081	288 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YIP4	P53093	235 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	PUS6	P53294	404 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YNL260C	P53846	198 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	SMX3	P54999	86 aa	Predicted RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	RCR2	Q03446	210 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	GOT1	Q03554	138 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	GTO3	Q04806	366 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	TDA6	Q06466	467 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	CTR3	Q06686	241 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	AAD4	Q07747	329 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	RPL13A	Q12690	199 aa	Predicted RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	RAS2	P01120	322 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	HTA2	P04912	132 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	PHO2	P07269	559 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	PMI40	P29952	429 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	MTH1	P35198	433 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	VAC8	P39968	578 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	PFS2	P42841	465 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	RPA43	P46669	326 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	GPI14	P47088	403 aa	Known RBP	4.75	□□□□□ -1.65
DBF4	YDR052C	MGA1	P53050	456 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms