RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 AKAP3O75969 853 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ADRB2P07550 413 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 HARSP12081 509 aaKnown RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ITGA4P13612 1032 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 CASP4P49662 377 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ACOT2P49753 483 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ENPEPQ07075 957 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 SURF1Q15526 300 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 TMEM240Q5SV17 173 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ECHDC2Q86YB7 292 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 CD302Q8IX05 232 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 CEP120Q8N960 986 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 MFSD14AQ96MC6 490 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 RPF1Q9H9Y2 349 aaKnown RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 PLEKHA5Q9HAU0 1116 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
LINC00339-213ENST00000642137 UBN1Q9NPG3 1134 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 SNTG2Q9NY99 539 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 NFE2L3Q9Y4A8 694 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 DNAH12Q6ZR08 3092 aa13.41□□□□□ -0.26
LINC00339-213ENST00000642137 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 EPB41P11171 864 aaKnown RBP13.4□□□□□ -0.26
LINC00339-213ENST00000642137 TNFSF9P41273 254 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 YARSP54577 528 aaKnown RBP13.4□□□□□ -0.26
LINC00339-213ENST00000642137 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
LINC00339-213ENST00000642137 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
LINC00339-213ENST00000642137 SEZ6Q53EL9 994 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 FAM186BQ8IYM0 893 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 TSPAN18Q96SJ8 248 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 SAMSN1Q9NSI8 373 aaKnown RBP13.4□□□□□ -0.26
LINC00339-213ENST00000642137 TMEM161AQ9NX61 479 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 PARP2Q9UGN5 583 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 GIT1Q9Y2X7 761 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 TTC3P53804 2025 aa13.4□□□□□ -0.26
LINC00339-213ENST00000642137 GOLGA6L19H0YKK7 550 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 EPHB4P54760 987 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 OSTNP61366 133 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TPM4P67936 248 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 SLC10A6Q3KNW5 377 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 LUZP1Q86V48 1076 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TMC2Q8TDI7 906 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 HERVK_113Q902F9 699 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 ASB7Q9H672 318 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-213ENST00000642137 HES2Q9Y543 173 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 CITO14578 2027 aa13.39□□□□□ -0.27
LINC00339-213ENST00000642137 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 IL18RAPO95256 599 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 AMHP03971 560 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 KRT13P13646 458 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 ZNF18P17022 549 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 AKAP5P24588 427 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 EEF1GP26641 437 aaKnown RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 SPAG1Q07617 926 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 PSMD6Q15008 389 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 ENOX2Q16206 610 aaKnown RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 USP37Q86T82 979 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 NPAS4Q8IUM7 802 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms