RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A1CFQ9NQ94 594 aaKnown RBP14.84□□□□□ -0.03
PHGDH-233ENST00000642021 TPX2Q9ULW0 747 aaKnown RBP14.84□□□□□ -0.03
PHGDH-233ENST00000642021 GGPS1O95749 300 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 DLATP10515 647 aaKnown RBP14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CYP11B1P15538 503 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 PEX3P56589 373 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 GTF2BQ00403 316 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CCDC91Q7Z6B0 441 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 SHC3Q92529 594 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 HERPUD2Q9BSE4 406 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 TRIM7Q9C029 511 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 TOPORSQ9NS56 1045 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CEP83Q9Y592 693 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 NFIBO00712 420 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 ASAP2O43150 1006 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 GRIN3BO60391 1043 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 TRAF1Q13077 416 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 SNX1Q13596 522 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 LRRC14Q15048 493 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CNGA2Q16280 664 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 UGCGQ16739 394 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 OTUD6AQ7L8S5 288 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 CEP120Q8N960 986 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 HELQQ8TDG4 1101 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.04
PHGDH-233ENST00000642021 KIFC3Q9BVG8 833 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.04
PHGDH-233ENST00000642021 PARP2Q9UGN5 583 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 SYNPO2Q9UMS6 1093 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 SH3BP1Q9Y3L3 701 aa14.83□□□□□ -0.04
PHGDH-233ENST00000642021 YDJCA8MPS7 323 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 ACSL3O95573 720 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 VIMP08670 466 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 IBSPP21815 317 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 CHKAP35790 457 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 SLMAPQ14BN4 828 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 PHLDB2Q86SQ0 1253 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 TMEM174Q8WUU8 243 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 DDX1Q92499 740 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 CDC42EP4Q9H3Q1 356 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 HERC5Q9UII4 1024 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 MTUS1Q9ULD2 1270 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 AFF2P51816 1311 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 MAPTP10636 758 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 GHRP10912 638 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 RWDD2BP57060 319 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 GPATCH11Q8N954 259 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 ATG4AQ8WYN0 398 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 LRRC19Q9H756 370 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 CHST7Q9NS84 486 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 DNAJC17Q9NVM6 304 aaKnown RBP14.82□□□□□ -0.04
PHGDH-233ENST00000642021 GGT7Q9UJ14 662 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 GTF3C4Q9UKN8 822 aa14.82□□□□□ -0.04
PHGDH-233ENST00000642021 MRPS9P82933 396 aaKnown RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 PPP1R7Q15435 360 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 TRIP13Q15645 432 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 SNRNP35Q16560 246 aaKnown RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 TAS1R2Q8TE23 839 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 VTI1AQ96AJ9 217 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 PWWP2AQ96N64 755 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 CCDC134Q9H6E4 229 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 CTNNAL1Q9UBT7 734 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 PASKQ96RG2 1323 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 SLX4Q8IY92 1834 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 DNAJC8O75937 253 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 ECEL1O95672 775 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 YWHABP31946 246 aaKnown RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 GBP1P32455 592 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 QARSP47897 775 aaKnown RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 CDR2Q01850 454 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 SNCBQ16143 134 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 C2CD6Q53TS8 623 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 DAB2IPQ5VWQ8 1189 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 LLGL2Q6P1M3 1020 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 C12orf50Q8NA57 414 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-233ENST00000642021 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 PARD3BQ8TEW8 1205 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 ZNF536O15090 1300 aa14.81□□□□□ -0.04
PHGDH-233ENST00000642021 FSCN2O14926 492 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 CHRNA5P30532 468 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 HSD17B4P51659 736 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 MFAP3P55082 362 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 KRT17Q04695 432 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 NBPF20Q3BBV1 942 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 TKFCQ3LXA3 575 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 PLA2G4FQ68DD2 849 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 P3H4Q92791 437 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 AGO4Q9HCK5 861 aaKnown RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 MLXIPLQ9NP71 852 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ABCF3Q9NUQ8 709 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 CD2APQ9Y5K6 639 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms