RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 ADI1Q9BV57 179 aa6.9□□□□□ -1.31
CASC19-261ENST00000641853 CPEB1Q9BZB8 566 aaKnown RBP6.9□□□□□ -1.31
CASC19-261ENST00000641853 DNM3Q9UQ16 869 aa6.9□□□□□ -1.31
CASC19-261ENST00000641853 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 NCLP19338 710 aaKnown RBP6.89□□□□□ -1.31
CASC19-261ENST00000641853 SREBF1P36956 1147 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 EXOSC10Q01780 885 aaKnown RBP6.89□□□□□ -1.31
CASC19-261ENST00000641853 MGAT2Q10469 447 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 ANKRD35Q8N283 1001 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 OR7D4Q8NG98 312 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 NRG4Q8WWG1 115 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 SSH1Q8WYL5 1049 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 EXTL1Q92935 676 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 SLC13A1Q9BZW2 595 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 RUSC2Q8N2Y8 1516 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 KIAA0586Q9BVV6 1533 aa6.89□□□□□ -1.31
CASC19-261ENST00000641853 INSRRP14616 1297 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 ACRV1P26436 265 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 ECHS1P30084 290 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 APBB1IPQ7Z5R6 666 aaPredicted RBP6.88□□□□□ -1.31
CASC19-261ENST00000641853 SH3RF3Q8TEJ3 882 aaPredicted RBP6.88□□□□□ -1.31
CASC19-261ENST00000641853 ST8SIA2Q92186 375 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 PDCD2LQ9BRP1 358 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 KCNH6Q9H252 994 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 ATRNL1Q5VV63 1379 aa6.88□□□□□ -1.31
CASC19-261ENST00000641853 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 KLRG2A4D1S0 409 aaPredicted RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 GNAT2P19087 354 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 RRP1BQ14684 758 aaKnown RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 PNMA8AQ86V59 439 aaPredicted RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.87□□□□□ -1.31
CASC19-261ENST00000641853 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 ATXN2LQ8WWM7 1075 aaKnown RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 PGBD4Q96DM1 585 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 LDAHQ9H6V9 325 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 SERPINB13Q9UIV8 391 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 INTUQ9ULD6 942 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 GIT1Q9Y2X7 761 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 PRG4Q92954 1404 aaPredicted RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 ZRANB2O95218 330 aaKnown RBP eCLIP6.87□□□□□ -1.31
CASC19-261ENST00000641853 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 HK1P19367 917 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 USP39Q53GS9 565 aaKnown RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 GPRIN1Q7Z2K8 1008 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 GGNQ86UU5 652 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 PQLC1Q8N2U9 271 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 OR52N2Q8NGI0 321 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 SLC35B2Q8TB61 432 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 CPPED1Q9BRF8 314 aaPredicted RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
CASC19-261ENST00000641853 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 MRFAP1Q9Y605 127 aa6.87□□□□□ -1.31
CASC19-261ENST00000641853 MFAP3LO75121 409 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 EDNRBP24530 442 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 GUCY1A2P33402 732 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 PTPN7P35236 360 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 WASP42768 502 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 HTR3DQ70Z44 454 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 DOK3Q7L591 496 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 ZNF572Q7Z3I7 529 aaPredicted RBP6.86□□□□□ -1.31
CASC19-261ENST00000641853 GSPT2Q8IYD1 628 aaKnown RBP6.86□□□□□ -1.31
CASC19-261ENST00000641853 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
CASC19-261ENST00000641853 STON2Q8WXE9 905 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 GPR87Q9BY21 358 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 SPEF1Q9Y4P9 236 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
CASC19-261ENST00000641853 IPO13O94829 963 aaKnown RBP6.85□□□□□ -1.31
CASC19-261ENST00000641853 ALOX15P16050 662 aaPredicted RBP6.85□□□□□ -1.31
CASC19-261ENST00000641853 FPR1P21462 350 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 FAM180AQ6UWF9 173 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.85□□□□□ -1.31
CASC19-261ENST00000641853 UHRF1Q96T88 793 aaPredicted RBP6.85□□□□□ -1.31
CASC19-261ENST00000641853 MNTQ99583 582 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 IPPQ9Y573 584 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 ERCC6L2Q5T890 1561 aa6.85□□□□□ -1.31
CASC19-261ENST00000641853 CYP27B1O15528 508 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 AMY1AP04745 511 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 MAN2A2P49641 1150 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 FLT3LGP49771 235 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 NEK2P51955 445 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 PER3P56645 1201 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 KIF23Q02241 960 aaPredicted RBP6.84□□□□□ -1.31
CASC19-261ENST00000641853 NRN1LQ496H8 165 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 FAM47AQ5JRC9 791 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 EFCAB2Q5VUJ9 269 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 FAM83AQ86UY5 434 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 C1orf210Q8IVY1 113 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 ZGPATQ8N5A5 531 aaKnown RBP6.84□□□□□ -1.31
CASC19-261ENST00000641853 CEP72Q9P209 647 aa6.84□□□□□ -1.31
CASC19-261ENST00000641853 MATN3O15232 486 aa6.83□□□□□ -1.32
CASC19-261ENST00000641853 HTRA2O43464 458 aaPredicted RBP6.83□□□□□ -1.32
CASC19-261ENST00000641853 ENDOD1O94919 500 aa6.83□□□□□ -1.32
CASC19-261ENST00000641853 CCND1P24385 295 aa6.83□□□□□ -1.32
CASC19-261ENST00000641853 PCSK1P29120 753 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms