RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SFNP31947 248 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 FXR2P51116 673 aaKnown RBP eCLIP8.23□□□□□ -1.094e-8■■■□□ 17.3
PHGDH-225ENST00000641720 PRKCEQ02156 737 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 GIT2Q14161 759 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 SWSAP1Q6NVH7 229 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 TAS1R1Q7RTX1 841 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 CABP7Q86V35 215 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 IGSF22Q8N9C0 903 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 RDM1Q8NG50 284 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MRPL9Q9BYD2 267 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 EPC1Q9H2F5 836 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 RXFP1Q9HBX9 757 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MAN1C1Q9NR34 630 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 RGL1Q9NZL6 768 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 TFIP11Q9UBB9 837 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 GABBR1Q9UBS5 961 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 FBXO2Q9UK22 296 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 RALYQ9UKM9 306 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MTF2Q9Y483 593 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 SAMM50Q9Y512 469 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 PCDHA10Q9Y5I2 948 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 F8W810 466 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 LAD1O00515 517 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 SPTLC1O15269 473 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 MED24O75448 989 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 BMP15O95972 392 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 LAMP2P13473 410 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 CDC25AP30304 524 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 NUCB2P80303 420 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 CYP4A11Q02928 519 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 SLC39A14Q15043 492 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 ST3GAL2Q16842 350 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 VARS2Q5ST30 1063 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 UBXN11Q5T124 520 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 FAM160B1Q5W0V3 765 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 ARL6IP4Q66PJ3 421 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 EFCAB12Q6NXP0 572 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 LILRA6Q6PI73 481 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 USP49Q70CQ1 688 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 PPFIBP1Q86W92 1011 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 LINC00301Q8NCQ3 95 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 FGF14Q92915 247 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF396Q96N95 335 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 EIF2AK1Q9BQI3 630 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 LXNQ9BS40 222 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 MMTAG2Q9BU76 263 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 HERC2P3Q9BVR0 1158 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 PRMT8Q9NR22 394 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 FBXO4Q9UKT5 387 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 FBXL21Q9UKT6 434 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 PCDHA12Q9UN75 941 aa8.22□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF638Q14966 1978 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 ASH1LQ9NR48 2969 aaKnown RBP8.22□□□□□ -1.09
PHGDH-225ENST00000641720 A0A087WWV3 80 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 DCDC2BA2VCK2 349 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ZBTB39O15060 712 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 TEX28O15482 410 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 YEATS4O95619 227 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SOD2P04179 222 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 OATP04181 439 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 HOXB3P14651 431 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ALDH7A1P49419 539 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 DSC1Q08554 894 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CTTNQ14247 550 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 STK38Q15208 465 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 EPHA7Q15375 998 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ECM1Q16610 540 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 NOMO2Q5JPE7 1267 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SPECC1Q5M775 1068 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 PLA2G4FQ68DD2 849 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ZC3H14Q6PJT7 736 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CYP26C1Q6V0L0 522 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 DTHD1Q6ZMT9 781 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ANO5Q75V66 913 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 TRMT1LQ7Z2T5 733 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 MRPL10Q7Z7H8 261 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ABI1Q8IZP0 508 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ST13P5Q8NFI4 369 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 KCNG4Q8TDN1 519 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 LRRC15Q8TF66 581 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 LEO1Q8WVC0 666 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 RSPH1Q8WYR4 309 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CLDN23Q96B33 292 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CLIC6Q96NY7 704 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 RPS6KC1Q96S38 1066 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 HSD17B14Q9BPX1 270 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CSRNP2Q9H175 543 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CHST7Q9NS84 486 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 FAM105AQ9NUU6 356 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms