RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 KIAA1586Q9HCI6 787 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 TNFSF13BQ9Y275 285 aa11.31□□□□□ -0.6
CASC19-247ENST00000641642 BRCA2P51587 3418 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 HNRNPDLO14979 420 aaKnown RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 N4BP3O15049 544 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 MAPK13O15264 365 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 WIPF1O43516 503 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 TIMP1P01033 207 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 PFKMP08237 780 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 HOXD13P35453 343 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 ZNF165P49910 485 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 LIG4P49917 911 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 AMHR2Q16671 573 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 ANO6Q4KMQ2 910 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 SMYD4Q8IYR2 804 aaPredicted RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 BICD1Q96G01 975 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 ACO2Q99798 780 aaKnown RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
CASC19-247ENST00000641642 MINDY3Q9H8M7 445 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 GINS2Q9Y248 185 aa11.3□□□□□ -0.6
CASC19-247ENST00000641642 CCDC85CA6NKD9 419 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 CLDN3O15551 220 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 GNA14O95837 355 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 CXCL10P02778 98 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 CTSHP09668 335 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 SKIP12755 728 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 ZSCAN20P17040 1043 aaPredicted RBP11.29□□□□□ -0.6
CASC19-247ENST00000641642 PROZP22891 400 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 MYL5Q02045 173 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 ENPEPQ07075 957 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 PAK2Q13177 524 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 ATF7IP2Q5U623 682 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 SPATA1Q5VX52 437 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 TTI2Q6NXR4 508 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 MPZL3Q6UWV2 235 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 FAM228AQ86W67 206 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
CASC19-247ENST00000641642 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
CASC19-247ENST00000641642 GLIS3Q8NEA6 775 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 PTPRHQ9HD43 1115 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 AGPAT3Q9NRZ7 376 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 ST3GAL5Q9UNP4 418 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 MAPK8IP1Q9UQF2 711 aa11.29□□□□□ -0.6
CASC19-247ENST00000641642 NOC2LQ9Y3T9 749 aaKnown RBP11.29□□□□□ -0.6
CASC19-247ENST00000641642 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 A0A0B4J269 797 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 BECN2A8MW95 431 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 CETN3O15182 167 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 SIAH2O43255 324 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 TSPAN1O60635 241 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 EFCAB14O75071 495 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 MCF2P10911 925 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
CASC19-247ENST00000641642 RAG1P15918 1043 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
CASC19-247ENST00000641642 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
CASC19-247ENST00000641642 RAB27AP51159 221 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 TPM4P67936 248 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 MCL1Q07820 350 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 KCNA1Q09470 495 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 LPIN1Q14693 890 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 PLEKHG4Q58EX7 1191 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
CASC19-247ENST00000641642 KLHL10Q6JEL2 608 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 MFSD5Q6N075 450 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 FILIP1Q7Z7B0 1213 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 USP37Q86T82 979 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 FAM114A1Q8IWE2 563 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
CASC19-247ENST00000641642 HACE1Q8IYU2 909 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms