RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 EVPLQ92817 2033 aa14.08□□□□□ -0.15
PHGDH-220ENST00000641570 TISP43B9A030 160 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 EEF1GP26641 437 aaKnown RBP14.08□□□□□ -0.16
PHGDH-220ENST00000641570 GRM5P41594 1212 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 ACOT2P49753 483 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 EEF1DP3Q658K8 133 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 TRAF7Q6Q0C0 670 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 GLB1LQ6UWU2 654 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 CD302Q8IX05 232 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 CNOT6LQ96LI5 555 aaKnown RBP14.08□□□□□ -0.16
PHGDH-220ENST00000641570 EIF2AQ9BY44 585 aaKnown RBP14.08□□□□□ -0.16
PHGDH-220ENST00000641570 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-220ENST00000641570 IPPQ9Y573 584 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 STYXL1Q9Y6J8 313 aa14.08□□□□□ -0.16
PHGDH-220ENST00000641570 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 MAPK13O15264 365 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 EOMESO95936 686 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 TNNC2P02585 160 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 TMEM191BP0C7N4 346 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 ACRP10323 421 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 DLATP10515 647 aaKnown RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 TNNI1P19237 187 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 PROZP22891 400 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 HOXA11P31270 313 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 HOXD13P35453 343 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 PMS1P54277 932 aaKnown RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 RNASELQ05823 741 aaKnown RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 ZCWPW2Q504Y3 356 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 FKBP15Q5T1M5 1219 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 NPAS4Q8IUM7 802 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 CCDC150Q8NCX0 1101 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 RSPH1Q8WYR4 309 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 ZBED2Q9BTP6 218 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 RSAD1Q9HA92 442 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 GIT1Q9Y2X7 761 aa14.07□□□□□ -0.16
PHGDH-220ENST00000641570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.07□□□□□ -0.16
PHGDH-220ENST00000641570 TRIP12Q14669 1992 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-220ENST00000641570 A0A0U1RQF3 1178 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 CBFA2T2O43439 604 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
PHGDH-220ENST00000641570 PHACTR2O75167 634 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 RECQL4O94761 1208 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 UPP2O95045 317 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 EDN1P05305 212 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
PHGDH-220ENST00000641570 HSP90AA4PQ58FG1 418 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 SLC39A4Q6P5W5 647 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 OTOP2Q7RTS6 562 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 ECHDC2Q86YB7 292 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 CCDC127Q96BQ5 260 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 EEF2KMTQ96G04 330 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
PHGDH-220ENST00000641570 IKZF4Q9H2S9 585 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 MMRN2Q9H8L6 949 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 PTPRHQ9HD43 1115 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 SLC38A7Q9NVC3 462 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 TMEM161AQ9NX61 479 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
PHGDH-220ENST00000641570 BRCA2P51587 3418 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 AKAP3O75969 853 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 CXCL8P10145 99 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 AKAP5P24588 427 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 ADSSP30520 456 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 VAMP7P51809 220 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 AP3M2P53677 418 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 TFAMQ00059 246 aaKnown RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 BFSP1Q12934 665 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 BIRC3Q13489 604 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 TMEM132DQ14C87 1099 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 SEZ6Q53EL9 994 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 SPOUT1Q5T280 376 aaKnown RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 CBWD2Q8IUF1 395 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 TSPAN18Q96SJ8 248 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 IMPG2Q9BZV3 1241 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 ELAC1Q9H777 363 aaKnown RBP14.05□□□□□ -0.16
PHGDH-220ENST00000641570 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
PHGDH-220ENST00000641570 HES2Q9Y543 173 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms