RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 PGK2P07205 417 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 KRT7P08729 469 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 TAC1P20366 129 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 CASP2P42575 452 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 NLRP11P59045 1033 aaKnown RBP9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 PDIA6Q15084 440 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 KRT31Q15323 416 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 ZNF746Q6NUN9 644 aaPredicted RBP9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 LRRC8AQ8IWT6 810 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 ARHGAP18Q8N392 663 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 FAM71BQ8TC56 605 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 MED15Q96RN5 788 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 MTG1Q9BT17 334 aaPredicted RBP9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 KCNH7Q9NS40 1196 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 FRMD3A2A2Y4 597 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 IL1R1P14778 569 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 ZFXP17010 805 aaPredicted RBP9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 VCAM1P19320 739 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 CACNA2D3Q8IZS8 1091 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 SCG3Q8WXD2 468 aaKnown RBP9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 GJB4Q9NTQ9 266 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 HSPBP1Q9NZL4 362 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 RNF14Q9UBS8 474 aa9.92□□□□□ -0.82
CACNA1D-230ENST00000640483 C2CD2LO14523 706 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 HGSO14964 777 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SNX2O60749 519 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SERPINB6P35237 376 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 RASSF2P50749 326 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 NOP14P78316 857 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SLC12A1Q13621 1099 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SGSM1Q2NKQ1 1148 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 TAF1BQ53T94 588 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SH2D4BQ5SQS7 431 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PDIK1LQ8N165 341 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 ANKEF1Q9NU02 776 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 EMSYQ7Z589 1322 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 FMN2Q9NZ56 1722 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 DFFAO00273 331 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 ALDH1A2O94788 518 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 FTCDO95954 541 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 HERVK_113P62684 666 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 GUCY2DQ02846 1103 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PPATQ06203 517 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 LRRC8CQ8TDW0 803 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 TUBE1Q9UJT0 475 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PPP1R9AQ9ULJ8 1098 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 HEY1Q9Y5J3 304 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 E5RI56 91 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PDXKO00764 312 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SLC16A3O15427 465 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 NDUFS2O75306 463 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 OCM2P0CE71 109 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 OCMP0CE72 109 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 AKR1A1P14550 325 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PAN2Q504Q3 1202 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 TDRD10Q5VZ19 366 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 FBXO16Q8IX29 292 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 GUF1Q8N442 669 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CDC26Q8NHZ8 85 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 TEKT4Q8WW24 435 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 TSSK1BQ9BXA7 367 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 EMILIN2Q9BXX0 1053 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CARNS1A5YM72 827 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PQBP1O60828 265 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 SRGAP2O75044 1071 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 ACTR2P61160 394 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 NSUN2Q08J23 767 aaKnown RBP eCLIP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CDKL3Q8IVW4 592 aaPredicted RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CEP120Q8N960 986 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 GMCL1P1Q8NEA9 526 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 DHX35Q9H5Z1 703 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 KLHL14Q9P2G3 628 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 EGFRP00533 1210 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 HSPA8P11142 646 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 NMT1P30419 496 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 KCNB1Q14721 858 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 BBS9Q3SYG4 887 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 PLA2G4FQ68DD2 849 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 HEATR6Q6AI08 1181 aaKnown RBP9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 CENPUQ71F23 418 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 WDR48Q8TAF3 677 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 DCUN1D1Q96GG9 259 aa9.91□□□□□ -0.82
CACNA1D-230ENST00000640483 IGSF9BQ9UPX0 1349 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 MIF4GDA9UHW6 222 aaKnown RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 INPP5BP32019 993 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 NAA30Q147X3 362 aaPredicted RBP9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 BRD3Q15059 726 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 FRMD5Q7Z6J6 570 aa9.9□□□□□ -0.82
CACNA1D-230ENST00000640483 GPT2Q8TD30 523 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms