RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MAN1B1Q9UKM7 699 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 Q9Y3F1 56 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 ARID2Q68CP9 1835 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 BRCA2P51587 3418 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 ARHGEF35A5YM69 484 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 DUSP11O75319 330 aaKnown RBP8.77□□□□□ -1
SCARB2-220ENST00000640076 LGALS2P05162 132 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 MMP3P08254 477 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 BMP6P22004 513 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 SLC26A2P50443 739 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 NPEPPSP55786 919 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 GRM2Q14416 872 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 INO80DQ53TQ3 878 aaPredicted RBP8.77□□□□□ -1
SCARB2-220ENST00000640076 XKR9Q5GH70 373 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 PLA2G4FQ68DD2 849 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 RINT1Q6NUQ1 792 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 C1orf186Q6ZWK4 172 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 TRIML1Q8N9V2 468 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 C1orf131Q8NDD1 294 aaKnown RBP8.77□□□□□ -1
SCARB2-220ENST00000640076 LRCH3Q96II8 777 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 INO80BQ9C086 356 aaPredicted RBP8.77□□□□□ -1
SCARB2-220ENST00000640076 AP5M1Q9H0R1 490 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 SMARCAD1Q9H4L7 1026 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 KCND2Q9NZV8 630 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 HCN4Q9Y3Q4 1203 aa8.77□□□□□ -1
SCARB2-220ENST00000640076 NPHP3-ACAD11A0A0J9YXS1 232 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF286BP0CG31 522 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 COL6A1P12109 1028 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 CCND3P30281 292 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-220ENST00000640076 GRK4P32298 578 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 POU5F1Q01860 360 aaKnown RBP8.77□□□□□ -1.01
SCARB2-220ENST00000640076 MORC3Q14149 939 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 KCNB1Q14721 858 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 STX1AQ16623 288 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 DGKDQ16760 1214 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ISM2Q6H9L7 571 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ZSWIM2Q8NEG5 633 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ATP8B4Q8TF62 1192 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 FAM167AQ96KS9 214 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 CCDC43Q96MW1 224 aaKnown RBP8.77□□□□□ -1.01
SCARB2-220ENST00000640076 SH2D3AQ9BRG2 576 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 C16orf70Q9BSU1 422 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
SCARB2-220ENST00000640076 SUV39H2Q9H5I1 410 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 RMND1Q9NWS8 449 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ERAP1Q9NZ08 941 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
SCARB2-220ENST00000640076 PVALEFA0A1B0GWK0 134 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 KATNA1O75449 491 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 RHOBTB3O94955 611 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GJB6O95452 261 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 RARBP10826 455 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 IDEP14735 1019 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GUCY2CP25092 1073 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 VARSP26640 1264 aaKnown RBP8.76□□□□□ -1.01
SCARB2-220ENST00000640076 MARK3P27448 753 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 CPT1AP50416 773 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GJA9P57773 515 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 NLRP12P59046 1061 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GIT2Q14161 759 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 PLCB4Q15147 1175 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 TEAD4Q15561 434 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 DPCR1Q3MIW9 517 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 UNC13DQ70J99 1090 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GAS2L3Q86XJ1 694 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 AFAP1L2Q8N4X5 818 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 PAF1Q8N7H5 531 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 GOLM1Q8NBJ4 401 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 E2F7Q96AV8 911 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 CEP170P1Q96L14 293 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 CDH19Q9H159 772 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 TSPY26PQ9H489 355 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 CYP26B1Q9NR63 512 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 NRBP2Q9NSY0 501 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 ANO10Q9NW15 660 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 PTPN22Q9Y2R2 807 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 MYH11P35749 1972 aa8.76□□□□□ -1.01
SCARB2-220ENST00000640076 FRMD3A2A2Y4 597 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 RSPH10B2B2RC85 870 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 USO1O60763 962 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 PF4P02776 101 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 RSPH10BP0C881 870 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 HSPA8P11142 646 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 NKX3-2P78367 333 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 BEX3Q00994 111 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 TARBP2Q15633 366 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 FSCN1Q16658 493 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ANO6Q4KMQ2 910 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 CCDC65Q8IXS2 484 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 CCDC47Q96A33 483 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 UPF3AQ9H1J1 476 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 TNKS2Q9H2K2 1166 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 RNPEPQ9H4A4 650 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 EXOC1Q9NV70 894 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 PANK4Q9NVE7 773 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF215Q9UL58 517 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 SYNRGQ9UMZ2 1314 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms