RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PHF2O75151 1096 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 ESRRBO95718 433 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 CXCR5P32302 372 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 ADCYAP1R1P41586 468 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 ELLP55199 621 aaPredicted RBP5.08□□□□□ -1.6
CCDC7-211ENST00000638889 SEPT7Q16181 437 aaKnown RBP5.08□□□□□ -1.6
CCDC7-211ENST00000638889 C21orf62-AS1Q17RA5 79 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 CCDC144BQ3MJ40 725 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 BROXQ5VW32 411 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 RASSF3Q86WH2 238 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 MS4A5Q9H3V2 200 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 PRDM13Q9H4Q3 707 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 PLAAQ9Y263 795 aa5.08□□□□□ -1.6
CCDC7-211ENST00000638889 MAST3O60307 1309 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 RPTORQ8N122 1335 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 UNC119BA6NIH7 251 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 SPDEFO95238 335 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 FOSP01100 380 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 CFIP05156 583 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 ZNF37AP17032 561 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 ATXN1P54253 815 aaKnown RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 RESTQ13127 1097 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 MPP3Q13368 585 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 TP53BP2Q13625 1128 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 TKFCQ3LXA3 575 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 FAM47AQ5JRC9 791 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 GJC2Q5T442 439 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 AGAP9Q5VTM2 703 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 RNF169Q8NCN4 708 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 SIMC1Q8NDZ2 872 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 MDM1Q8TC05 714 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 SLC5A5Q92911 643 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 CEP95Q96GE4 821 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 TARS2Q9BW92 718 aaKnown RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 WDR26Q9H7D7 661 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 EMC7Q9NPA0 242 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 RNF181Q9P0P0 153 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
CCDC7-211ENST00000638889 NOC2LQ9Y3T9 749 aaKnown RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 USP15Q9Y4E8 981 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-211ENST00000638889 SPATA31A6Q5VVP1 1343 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 DRGXA6NNA5 263 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 CDKL5O76039 1030 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 SNRPA1P09661 255 aaKnown RBP5.06□□□□□ -1.6
CCDC7-211ENST00000638889 MPLP40238 635 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 CLRN1P58418 232 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 MFSD14BQ5SR56 506 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 ATXN7L2Q5T6C5 722 aaPredicted RBP5.06□□□□□ -1.6
CCDC7-211ENST00000638889 RHOT2Q8IXI1 618 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 DHX37Q8IY37 1157 aaKnown RBP5.06□□□□□ -1.6
CCDC7-211ENST00000638889 CAGE1Q8TC20 777 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 ASB10Q8WXI3 467 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 UBXN4Q92575 508 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 FUBP1Q96AE4 644 aaKnown RBP5.06□□□□□ -1.6
CCDC7-211ENST00000638889 KCTD10Q9H3F6 313 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 MAP3K2Q9Y2U5 619 aa5.06□□□□□ -1.6
CCDC7-211ENST00000638889 INO80B-WBP1J3KQ70 363 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 CDK4P11802 303 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 LGALS4P56470 323 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 SPDYE7PQ495Y7 208 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 PRAMEF14Q5SWL7 426 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 FAM98AQ8NCA5 519 aaKnown RBP5.05□□□□□ -1.6
CCDC7-211ENST00000638889 MFSD3Q96ES6 412 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 FEZ1Q99689 392 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 INO80BQ9C086 356 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-211ENST00000638889 PRDM12Q9H4Q4 367 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 ALG13Q9NP73 1137 aaKnown RBP5.05□□□□□ -1.6
CCDC7-211ENST00000638889 FANCLQ9NW38 375 aa5.05□□□□□ -1.6
CCDC7-211ENST00000638889 C1RP00736 705 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 CHN2P52757 468 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 MST1LQ2TV78 715 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
CCDC7-211ENST00000638889 ZNF572Q7Z3I7 529 aaPredicted RBP5.04□□□□□ -1.6
CCDC7-211ENST00000638889 BOLLQ8N9W6 283 aaKnown RBP5.04□□□□□ -1.6
CCDC7-211ENST00000638889 OR56A1Q8NGH5 318 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 RAX2Q96IS3 184 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 DRC1Q96MC2 740 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 NEU1Q99519 415 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 REXO4Q9GZR2 422 aaKnown RBP5.04□□□□□ -1.6
CCDC7-211ENST00000638889 PIF1Q9H611 641 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 BCO1Q9HAY6 547 aa5.04□□□□□ -1.6
CCDC7-211ENST00000638889 CXorf49A8MYA2 514 aaPredicted RBP5.03□□□□□ -1.6
CCDC7-211ENST00000638889 LPLP06858 475 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 ITGAMP11215 1152 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 FDXRP22570 491 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 SCAPQ12770 1279 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 FSCN1Q16658 493 aaKnown RBP5.03□□□□□ -1.6
CCDC7-211ENST00000638889 UGT8Q16880 541 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 ATP13A4Q4VNC1 1196 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 CT83Q5H943 113 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 FAM180AQ6UWF9 173 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 MAPKAPK5Q8IW41 473 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 DRC7Q8IY82 874 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 TMEM132CQ8N3T6 1108 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 OR7D4Q8NG98 312 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 SLC35B2Q8TB61 432 aa5.03□□□□□ -1.6
CCDC7-211ENST00000638889 LRFN3Q9BTN0 628 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms