RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	CEP57	Q86XR8	500 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	GPR65	Q8IYL9	337 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	SPEM1	Q8N4L4	309 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	FANCB	Q8NB91	859 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	ELSPBP1	Q96BH3	223 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	TRMT61B	Q9BVS5	477 aa	Known RBP	13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	HES2	Q9Y543	173 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	IPP	Q9Y573	584 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	WDFY3	Q8IZQ1	3526 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	DMXL2	Q8TDJ6	3036 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	TDRD15	B5MCY1	1934 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	TAF4	O00268	1085 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	SH2B2	O14492	632 aa	Predicted RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	SRGAP2C	P0DJJ0	459 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	CHRNB1	P11230	501 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	CCNE1	P24864	410 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	RBM25	P49756	843 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	PSMD5	Q16401	504 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	SLC5A9	Q2M3M2	681 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	POTEH	Q6S545	545 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	MICU3	Q86XE3	530 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	TMTC2	Q8N394	836 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	HASPIN	Q8TF76	798 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	GATA6	Q92908	595 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	CEP89	Q96ST8	783 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	SCNM1	Q9BWG6	230 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	EIF2A	Q9BY44	585 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	NIFK	Q9BYG3	293 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	MINDY3	Q9H8M7	445 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	RBM12	Q9NTZ6	932 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	GDE1	Q9NZC3	331 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	CACNG4	Q9UBN1	327 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	WASF3	Q9UPY6	502 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	SLC12A7	Q9Y666	1083 aa		13.12	□□□□□ -0.31
PAX6-238	ENST00000638755	LAMA1	P25391	3075 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	DDX11L8	A8MPP1	907 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	ADAM12	O43184	909 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	MAF	O75444	373 aa	Predicted RBP	13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	CEBPB	P17676	345 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	GDI1	P31150	447 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	XKR3	Q5GH77	459 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	DIEXF	Q68CQ4	756 aa	Known RBP	13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	TCEAL6	Q6IPX3	200 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755		Q6ZS52	159 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	TEX2	Q8IWB9	1127 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	CNNM3	Q8NE01	707 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	CRYGN	Q8WXF5	182 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	IRF7	Q92985	503 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	TCEAL3	Q969E4	200 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	TTPAL	Q9BTX7	342 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	GLT8D2	Q9H1C3	349 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	OSBPL3	Q9H4L5	887 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	ZFP14	Q9HCL3	533 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	C2orf42	Q9NWW7	574 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	COL4A3BP	Q9Y5P4	624 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755		V9GY48	417 aa	Predicted RBP	13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	8e-6	■■■■■ 107
PAX6-238	ENST00000638755	CNTNAP5	Q8WYK1	1306 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	SPAG17	Q6Q759	2223 aa		13.11	□□□□□ -0.31
PAX6-238	ENST00000638755	TICRR	Q7Z2Z1	1910 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	NRG2	O14511	850 aa	Predicted RBP	13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	ADAMTS3	O15072	1205 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	GAS7	O60861	476 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	EPN2	O95208	641 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	RHO	P08100	348 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	FCAR	P24071	287 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	JAK3	P52333	1124 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	PTGDR	Q13258	359 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	HDAC1	Q13547	482 aa	Predicted RBP	13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	FAM78A	Q5JUQ0	283 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	SH3PXD2A	Q5TCZ1	1133 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	FAM171A1	Q5VUB5	890 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	SRGAP1	Q7Z6B7	1085 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	KBTBD6	Q86V97	674 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	WDR5B	Q86VZ2	330 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	LNX1	Q8TBB1	728 aa	Predicted RBP	13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	GJA10	Q969M2	543 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	KIF12	Q96FN5	646 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	UNC45A	Q9H3U1	944 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	BARHL2	Q9NY43	387 aa		13.1	□□□□□ -0.31
PAX6-238	ENST00000638755	MSH4	O15457	936 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	ERLIN2	O94905	339 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	STBD1	O95210	358 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	PAPSS2	O95340	614 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	POU2F2	P09086	479 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	AKAP5	P24588	427 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	SFN	P31947	248 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	MCM5	P33992	734 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	OR1D2	P34982	312 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	MPL	P40238	635 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	RAP1GAP	P47736	663 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	PXN	P49023	591 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	LRRC32	Q14392	662 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	ITPR1	Q14643	2758 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	UVSSA	Q2YD98	709 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	PLA2G4F	Q68DD2	849 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	MIER3	Q7Z3K6	550 aa		13.09	□□□□□ -0.31
PAX6-238	ENST00000638755	CACNA2D4	Q7Z3S7	1137 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms