RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HAUS6Q7Z4H7 955 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 HOMER3Q9NSC5 361 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 MGRN1O60291 552 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 VIMP08670 466 aaKnown RBP21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 MSL1Q68DK7 614 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 KCNJ1P48048 391 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 CDR2Q01850 454 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 LDHDQ86WU2 507 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 BTBD6Q96KE9 485 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 PRMT6Q96LA8 375 aaPredicted RBP21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 TIPINQ9BVW5 301 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 KCNH7Q9NS40 1196 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 FSCN2O14926 492 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 LYPLA2O95372 231 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 CYP11B1P15538 503 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 NF2P35240 595 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 PDE6CP51160 858 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 NIPA1Q7RTP0 329 aa21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 PSPC1Q8WXF1 523 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZNF622Q969S3 477 aaKnown RBP eCLIP21.55■■□□□ 1.041e-6■■■■□ 23.5
SYNGAP1-227ENST00000638142 ELAC2Q9BQ52 826 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-227ENST00000638142 SLC8A1P32418 973 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ELF1P32519 619 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 CHADLQ6NUI6 762 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 EXOC3L1Q86VI1 746 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 CCDC25Q86WR0 208 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 CPNE8Q86YQ8 564 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 SLC17A8Q8NDX2 589 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZSWIM2Q8NEG5 633 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 SERPINB12Q96P63 405 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 CCDC113Q9H0I3 377 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 CDC42EP4Q9H3Q1 356 aaKnown RBP21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 DONSONQ9NYP3 566 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZNF536O15090 1300 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ADRB2P07550 413 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ATP5DP30049 168 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 QARSP47897 775 aaKnown RBP21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 HSD17B4P51659 736 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 MAP2K1Q02750 393 aaPredicted RBP21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 KRT39Q6A163 491 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 TRPM8Q7Z2W7 1104 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ACP6Q9NPH0 428 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 COQ4Q9Y3A0 265 aa21.54■■□□□ 1.04
SYNGAP1-227ENST00000638142 DHX15O43143 795 aaKnown RBP21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 GRIPAP1Q4V328 841 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 SGO2Q562F6 1265 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 SYDE1Q6ZW31 735 aaPredicted RBP21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 KIFAP3Q92845 792 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 AFF2P51816 1311 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 CLDN3O15551 220 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 KIF1CO43896 1103 aaKnown RBP21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 ITIH2P19823 946 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 MAN1A1P33908 653 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 IFNAR2P48551 515 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 GPC3P51654 580 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 NCKAP1LP55160 1127 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 ELF3P78545 371 aaPredicted RBP21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 KRT17Q04695 432 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 SNRNP35Q16560 246 aaKnown RBP21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 MAIP1Q8WWC4 291 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 SEMA4DQ92854 862 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 MTFR1LQ9H019 292 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 TMOD2Q9NZR1 351 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 PKD2L1Q9P0L9 805 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 FEM1BQ9UK73 627 aa21.53■■□□□ 1.04
SYNGAP1-227ENST00000638142 DLATP10515 647 aaKnown RBP21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 EZRP15311 586 aaKnown RBP21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 ACAD10Q6JQN1 1059 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 RHBDF2Q6PJF5 856 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 CEP57Q86XR8 500 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 HELQQ8TDG4 1101 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 TMEM8AQ9HCN3 771 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 AAASQ9NRG9 546 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 EXOC7Q9UPT5 735 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 TP73O15350 636 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 SNX3O60493 162 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 SCLT1Q96NL6 688 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 NT5C1BQ96P26 610 aa21.52■■□□□ 1.04
SYNGAP1-227ENST00000638142 GOLGA8IPA6NC78 632 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 CFAP73A6NFT4 308 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 GOLGA8JA6NMD2 632 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 SLC16A4O15374 487 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 CCDC38Q502W7 563 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 CBWD2Q8IUF1 395 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 CCDC63Q8NA47 563 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 DDX1Q92499 740 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 ARHGEF2Q92974 986 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 DDX23Q9BUQ8 820 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 OAS1P00973 400 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 YWHABP31946 246 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 PEX3P56589 373 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 LONRF1Q17RB8 773 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 HIBCHQ6NVY1 386 aaPredicted RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 NSMFQ6X4W1 530 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 PARD3BQ8TEW8 1205 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 DYDC1Q8WWB3 177 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 SNF8Q96H20 258 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms