RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 EXOC8Q8IYI6 725 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 HELQQ8TDG4 1101 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 DHX38Q92620 1227 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 AKT3Q9Y243 479 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 TMCO5BA8MYB1 307 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 ABLIM1O14639 778 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 FAM189A1O60320 539 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 TOM1L1O75674 476 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 SCP2P22307 547 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 RFX1P22670 979 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 NAP1L1P55209 391 aaKnown RBP23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 MBTD1Q05BQ5 628 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 PAXIP1Q6ZW49 1069 aaPredicted RBP23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 SYT11Q9BT88 431 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 IFT122Q9HBG6 1241 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 ZCCHC17Q9NP64 241 aaKnown RBP23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 NENFQ9UMX5 172 aa23.41■■□□□ 1.34
CHRNA7-228ENST00000637519 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 ZNF865P0CJ78 1059 aaPredicted RBP23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 GTF2H1P32780 548 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 PTENP60484 403 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 PPFIA1Q13136 1202 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 TFDP1Q14186 410 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 DGKDQ16760 1214 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 EEF1DP3Q658K8 133 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 C15orf39Q6ZRI6 1047 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 LINC01465Q8N7H1 131 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 CEP120Q8N960 986 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 USP6NLQ92738 828 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 EPC1Q9H2F5 836 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 ZFYVE28Q9HCC9 887 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 SEPT11Q9NVA2 429 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 CNTNAP2Q9UHC6 1331 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 A0A087WZ62 844 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 OSTNP61366 133 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 BIRC3Q13489 604 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 NAB2Q15742 525 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 GRIK4Q16099 956 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 MARCH8Q5T0T0 291 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 SPOPLQ6IQ16 392 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 MTHFD1LQ6UB35 978 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 TRAPPC11Q7Z392 1133 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 OR5B17Q8NGF7 314 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 NT5C1BQ96P26 610 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 ARID3AQ99856 593 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 FDXACB1Q9BRP7 624 aaPredicted RBP23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 C2orf40Q9H1Z8 148 aa23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 GNEQ9Y223 722 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-228ENST00000637519 TNPO2O14787 897 aaKnown RBP23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 TACC1O75410 805 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 HOXD8P13378 290 aaPredicted RBP23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 CLDN10P78369 228 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 KIF22Q14807 665 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 TMEM132AQ24JP5 1023 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 TLK2Q86UE8 772 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 TRIM58Q8NG06 486 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 ANKRD7Q92527 254 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 FAM212AQ96EL1 285 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 ARHGAP39Q9C0H5 1083 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 FZD8Q9H461 694 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 TAS2R14Q9NYV8 317 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 ZSWIM8A7E2V4 1837 aa23.39■■□□□ 1.34
CHRNA7-228ENST00000637519 KIAA0391O15091 583 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 NCK2O43639 380 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 LDHAP00338 332 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 CALCAP01258 141 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 C4BPAP04003 597 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 HOXC6P09630 235 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 PRPF4BQ13523 1007 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 BMS1Q14692 1282 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 ZACNQ401N2 412 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 ATF7IP2Q5U623 682 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 VPS36Q86VN1 386 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 MSL3Q8N5Y2 521 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 SLC30A5Q8TAD4 765 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 LUC7LQ9NQ29 371 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 SETD4Q9NVD3 440 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 GJD2Q9UKL4 321 aa23.39■■□□□ 1.33
CHRNA7-228ENST00000637519 CYP26A1O43174 497 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 VNN1O95497 513 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 HLA-DRAP01903 254 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 PIK3CAP42336 1068 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 ZNF568Q3ZCX4 644 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 THNSL1Q8IYQ7 743 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 PSMB7Q99436 277 aa23.38■■□□□ 1.33
CHRNA7-228ENST00000637519 ACKR2O00590 384 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 ZNF185O15231 689 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 SGPL1O95470 568 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 TAF3Q5VWG9 929 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 CAPZA3Q96KX2 299 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 NOX5Q96PH1 765 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 MCL1Q07820 350 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 TEX35Q5T0J7 233 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 PAPD7Q5XG87 772 aaKnown RBP23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 CYP4F22Q6NT55 531 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 SLC47A2Q86VL8 602 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 TMEM192Q8IY95 271 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 SHC3Q92529 594 aa23.37■■□□□ 1.33
CHRNA7-228ENST00000637519 ALS2CR12Q96Q35 445 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms