RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IQCF3P0C7M6 154 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 DARSP14868 501 aaKnown RBP16.65■□□□□ 0.26
CLN6-219ENST00000637329 AXLP30530 894 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 AP3M2P53677 418 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 DLG4P78352 724 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 CDK17Q00537 523 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
CLN6-219ENST00000637329 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 KIZQ2M2Z5 673 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 DCAF4L1Q3SXM0 396 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 KRT39Q6A163 491 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 CRELD2Q6UXH1 353 aaPredicted RBP16.65■□□□□ 0.26
CLN6-219ENST00000637329 TMTC1Q8IUR5 882 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 BAP1Q92560 729 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
CLN6-219ENST00000637329 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 SEZ6LQ9BYH1 1024 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN6-219ENST00000637329 INTS2Q9H0H0 1204 aaKnown RBP16.65■□□□□ 0.26
CLN6-219ENST00000637329 CDT1Q9H211 546 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 PDZD7Q9H5P4 517 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 COQ4Q9Y3A0 265 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 TTLL13PA6NNM8 815 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 CCP110O43303 1012 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 UCHL3P15374 230 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
CLN6-219ENST00000637329 KLHDC7AQ5VTJ3 777 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 LHX8Q68G74 356 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 DPY19L2P1Q6NXN4 242 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 PDXDC1Q6P996 788 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 SERINC5Q86VE9 423 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 DNAJB3Q8WWF6 145 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 ARMC5Q96C12 935 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
CLN6-219ENST00000637329 ADPGKQ9BRR6 497 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 APEX2Q9UBZ4 518 aa16.64■□□□□ 0.25
CLN6-219ENST00000637329 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
CLN6-219ENST00000637329 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
CLN6-219ENST00000637329 CENPFP49454 3210 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 M0QZ92 97 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 RNF225M0QZC1 329 aaPredicted RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 IL18RAPO95256 599 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 EIF4BP23588 611 aaKnown RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 GCLMP48507 274 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 ACOT2P49753 483 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 ACLYP53396 1101 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 MRPS6P82932 125 aaKnown RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 GDF6Q6KF10 455 aaPredicted RBP16.63■□□□□ 0.25
CLN6-219ENST00000637329 WDR49Q8IV35 697 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 GLT1D1Q96MS3 346 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
CLN6-219ENST00000637329 LRRC53A6NM62 1247 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 H0YGN5 161 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLN6-219ENST00000637329 CAND2O75155 1236 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 CLTAP09496 248 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 DLATP10515 647 aaKnown RBP16.62■□□□□ 0.25
CLN6-219ENST00000637329 HARSP12081 509 aaKnown RBP16.62■□□□□ 0.25
CLN6-219ENST00000637329 SLC9A1P19634 815 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 ZNF200P98182 395 aaPredicted RBP16.62■□□□□ 0.25
CLN6-219ENST00000637329 SNX17Q15036 470 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 CATSPER4Q7RTX7 472 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 EHBP1Q8NDI1 1231 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 FAM81BQ96LP2 452 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 OSMRQ99650 979 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 SPTLC3Q9NUV7 552 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 TRPV2Q9Y5S1 764 aa16.62■□□□□ 0.25
CLN6-219ENST00000637329 KBTBD13C9JR72 458 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 PTK7Q13308 1070 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 ITGA7Q13683 1181 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 ZACNQ401N2 412 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 ZBTB41Q5SVQ8 909 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 SMYD5Q6GMV2 418 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 SLC27A1Q6PCB7 646 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 WDR59Q6PJI9 974 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms