RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 MXI1P50539 228 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 STAT2P52630 851 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 GALNTL6Q49A17 601 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 ACCSLQ4AC99 568 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 NSMFQ6X4W1 530 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 C12orf56Q8IXR9 622 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 C1orf54Q8WWF1 131 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 TEKT3Q9BXF9 490 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 TMEM206Q9H813 350 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 DONSONQ9NYP3 566 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 HSPBP1Q9NZL4 362 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 SLX4Q8IY92 1834 aa23.1■■□□□ 1.29
CLN5-215ENST00000636767 KCNJ2P63252 427 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 TMEM174Q8WUU8 243 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 CTNNAL1Q9UBT7 734 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 VIL1P09327 827 aaKnown RBP23.09■■□□□ 1.29
CLN5-215ENST00000636767 NQO1P15559 274 aaKnown RBP23.09■■□□□ 1.29
CLN5-215ENST00000636767 ZNF268Q14587 947 aaPredicted RBP23.09■■□□□ 1.29
CLN5-215ENST00000636767 CCDC174Q6PII3 467 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 PPM1KQ8N3J5 372 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 XXYLT1Q8NBI6 393 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 STAMBPL1Q96FJ0 436 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 ACCSQ96QU6 501 aa23.09■■□□□ 1.29
CLN5-215ENST00000636767 FSCN2O14926 492 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 SGO2Q562F6 1265 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 RBM26Q5T8P6 1007 aaKnown RBP23.08■■□□□ 1.29
CLN5-215ENST00000636767 SHC3Q92529 594 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 ECT2Q9H8V3 914 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 LARSQ9P2J5 1176 aaKnown RBP23.08■■□□□ 1.29
CLN5-215ENST00000636767 UVRAGQ9P2Y5 699 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 USP20Q9Y2K6 914 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 FOXO6A8MYZ6 492 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 IPO5O00410 1097 aaKnown RBP23.08■■□□□ 1.29
CLN5-215ENST00000636767 SNX1Q13596 522 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 EBF2Q9HAK2 575 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 MLXIPLQ9NP71 852 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 ASIC3Q9UHC3 531 aa23.08■■□□□ 1.29
CLN5-215ENST00000636767 DDX39AO00148 427 aaKnown RBP23.07■■□□□ 1.28
CLN5-215ENST00000636767 SUN1O94901 812 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 ECE1P42892 770 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 ALCAMQ13740 583 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 TEX2Q8IWB9 1127 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 SUFUQ9UMX1 484 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 NPM3O75607 178 aaKnown RBP23.07■■□□□ 1.28
CLN5-215ENST00000636767 ADRB2P07550 413 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 MAPTP10636 758 aaKnown RBP23.07■■□□□ 1.28
CLN5-215ENST00000636767 NUGGCQ68CJ6 796 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 ANKRD42Q8N9B4 389 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 SEMA4DQ92854 862 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 MRIQ9BWK5 157 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 CHST7Q9NS84 486 aa23.07■■□□□ 1.28
CLN5-215ENST00000636767 ALADP13716 330 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 CYP11B1P15538 503 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 IVDP26440 423 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 ATP5DP30049 168 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 ALDH5A1P51649 535 aaPredicted RBP23.06■■□□□ 1.28
CLN5-215ENST00000636767 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
CLN5-215ENST00000636767 CKAP2Q8WWK9 683 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 DNAJC17Q9NVM6 304 aaKnown RBP23.06■■□□□ 1.28
CLN5-215ENST00000636767 PMM2O15305 246 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 TTC4O95801 387 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 GH1P01241 217 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 ITIH2P19823 946 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 BNIP1Q12981 228 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 TRAF1Q13077 416 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 MPP2Q14168 576 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 ATG4AQ8WYN0 398 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 MIEF2Q96C03 454 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 SNF8Q96H20 258 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 EHMT1Q9H9B1 1298 aa23.06■■□□□ 1.28
CLN5-215ENST00000636767 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLN5-215ENST00000636767 MAPK13O15264 365 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 KIF1CO43896 1103 aaKnown RBP23.05■■□□□ 1.28
CLN5-215ENST00000636767 GJB6O95452 261 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 RPSAP08865 295 aaKnown RBP23.05■■□□□ 1.28
CLN5-215ENST00000636767 MFAP3P55082 362 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 CDR2Q01850 454 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 SPATA21Q7Z572 469 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 GDAP1Q8TB36 358 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 AGAP11Q8TF27 550 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 KCNK9Q9NPC2 374 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 L3MBTL1Q9Y468 752 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 GOLGA8IPA6NC78 632 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 GOLGA8JA6NMD2 632 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 PLS3P13797 630 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 SCP2P22307 547 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 COPS2P61201 443 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 PTK6Q13882 451 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 PODNQ7Z5L7 613 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 GBP7Q8N8V2 638 aaPredicted RBP23.05■■□□□ 1.28
CLN5-215ENST00000636767 CCHCR1Q8TD31 782 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 HERPUD2Q9BSE4 406 aa23.05■■□□□ 1.28
CLN5-215ENST00000636767 SCN9AQ15858 1988 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 ATRNL1Q5VV63 1379 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 O00370 1275 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 ITGA8P53708 1063 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 CLNS1AP54105 237 aaKnown RBP23.04■■□□□ 1.28
CLN5-215ENST00000636767 MYO1EQ12965 1108 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 KYNUQ16719 465 aa23.04■■□□□ 1.28
CLN5-215ENST00000636767 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms