RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 CSGALNACT2Q8N6G5 542 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ZNF713Q8N859 430 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SLC43A3Q8NBI5 491 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CCDC110Q8TBZ0 833 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CKAP2Q8WWK9 683 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 EPSTI1Q96J88 318 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 PYM1Q9BRP8 204 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SLC26A6Q9BXS9 759 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 LRRC27Q9C0I9 530 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 FAM207AQ9NSI2 230 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 DDX43Q9NXZ2 648 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 DBR1Q9UK59 544 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 RABGAP1Q9Y3P9 1069 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 A0A1W2PQJ5 194 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TRIM49BA6NDI0 452 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TRIM75PA6NK02 468 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 E9PBE3 544 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 DDX3XO00571 662 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 CIB2O75838 187 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ZWINTO95229 277 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PGM3O95394 542 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ADAMTS2O95450 1211 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 NTSR2O95665 410 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 CYP2C9P11712 490 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 RXRAP19793 462 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 LIFRP42702 1097 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 RPL5P46777 297 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 KLK7P49862 253 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 RAB15P59190 212 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ACSBG2Q5FVE4 666 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 EARS2Q5JPH6 523 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 DSTYKQ6XUX3 929 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 C3orf62Q6ZUJ4 267 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TRIM22Q8IYM9 498 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 BBS5Q8N3I7 341 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SYMPKQ92797 1274 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 CYTH2Q99418 400 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SLC39A3Q9BRY0 314 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ANKRD2Q9GZV1 360 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TMEM60Q9H2L4 133 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 EPB41L1Q9H4G0 881 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TBC1D23Q9NUY8 699 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ZFP69BQ9UJL9 534 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SSX2IPQ9Y2D8 614 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PCDHB6Q9Y5E3 794 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ZNF646O15015 1829 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 GTPBP6O43824 516 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PDE8BO95263 885 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 CLPTM1O96005 669 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ALDH2P05091 517 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 YARSP54577 528 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 IL9RQ01113 521 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 GFPT1Q06210 699 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 THOC5Q13769 683 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 UBE4AQ14139 1066 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 DEPDC1Q5TB30 811 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 METTL21CQ5VZV1 264 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PDXDC1Q6P996 788 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TMC4Q7Z404 712 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 EPS8L3Q8TE67 593 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 COX4I2Q96KJ9 171 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 NSMCE3Q96MG7 304 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TTC1Q99614 292 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 HEPHQ9BQS7 1158 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 MRPL46Q9H2W6 279 aaKnown RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 RETREG1Q9H6L5 497 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PLGRKTQ9HBL7 147 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 KRT82Q9NSB4 513 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SALL4Q9UJQ4 1053 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 GIT1Q9Y2X7 761 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TTLL3Q9Y4R7 772 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 MROH5Q6ZUA9 1318 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 NAV1Q8NEY1 1877 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SH3PXD2BA1X283 911 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 DNAJC6O75061 913 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 MMP1P03956 469 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PRCPP42785 496 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 AP2B1P63010 937 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PPP2R5CQ13362 524 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 C16orf72Q14CZ0 275 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SEC23AQ15436 765 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SLC9C1Q4G0N8 1177 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 FIGNQ5HY92 759 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SYCP2LQ5T4T6 812 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 LMBRD2Q68DH5 695 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 RFWD3Q6PCD5 774 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 Q6ZNX1 250 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TTC30AQ86WT1 665 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 PLEKHO2Q8TD55 490 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 CCDC127Q96BQ5 260 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SLC7A6OSQ96CW6 309 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-213ENST00000636759 ANKRD36BP1Q96IX9 119 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TUBB6Q9BUF5 446 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TTYH3Q9C0H2 523 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 LRRC4CQ9HCJ2 640 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 SEL1LQ9UBV2 794 aa7.27□□□□□ -1.25
SCN1A-213ENST00000636759 TRMT112Q9UI30 125 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms