RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	ZNF746	Q6NUN9	644 aa	Predicted RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	VIT	Q6UXI7	678 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PLA2G4D	Q86XP0	818 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SMAP1	Q8IYB5	467 aa	Predicted RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CMTR1	Q8N1G2	835 aa	Known RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CTCFL	Q8NI51	663 aa	Predicted RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	HNRNPLL	Q8WVV9	542 aa	Known RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	RABGGTA	Q92696	567 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	LRIG1	Q96JA1	1093 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZC3H10	Q96K80	434 aa	Known RBP	11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZFP42	Q96MM3	310 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	GAD1	Q99259	594 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	NRBP2	Q9NSY0	501 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ADAM28	Q9UKQ2	775 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SAMM50	Q9Y512	469 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ASXL3	Q9C0F0	2248 aa		11	□□□□□ -0.65
SPTAN1-231	ENST00000636337	FAM86B1	E9PN63	330 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ADAM12	O43184	909 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	EXTL3	O43909	919 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZNF862	O60290	1169 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PLEKHA8P1	O95397	391 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	FAM86B2	P0C5J1	330 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ITGA4	P13612	1032 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PSMC3	P17980	439 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SMARCA1	P28370	1054 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SOX9	P48436	509 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PSMD5	Q16401	504 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	UAP1L1	Q3KQV9	507 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PLK5	Q496M5	336 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	DGKK	Q5KSL6	1271 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	UBXN11	Q5T124	520 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CWC27	Q6UX04	472 aa	Known RBP	10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	NIPA1	Q7RTP0	329 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	HEATR3	Q7Z4Q2	680 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZNF410	Q86VK4	478 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	RHPN2	Q8IUC4	686 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	KSR1	Q8IVT5	923 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	RILPL2	Q969X0	211 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	NLRP4	Q96MN2	994 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	DSCC1	Q9BVC3	393 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ANO3	Q9BYT9	981 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	UBN1	Q9NPG3	1134 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	MIOS	Q9NXC5	875 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ACACA	Q13085	2346 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	EML5	Q05BV3	1969 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	HECTD1	Q9ULT8	2610 aa		10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ASCC3	Q8N3C0	2202 aa	Known RBP	10.99	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SPAAR	A0A1B0GVQ0	90 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SLC38A8	A6NNN8	435 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CDX4	O14627	284 aa	Predicted RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZNF263	O14978	683 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	AKAP3	O75969	853 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SDS	P20132	328 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	DNM2	P50570	870 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PDE1A	P54750	535 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SCAP	Q12770	1279 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TRDN	Q13061	729 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SART3	Q15020	963 aa	Known RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ELF2	Q15723	593 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	UVSSA	Q2YD98	709 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CEP57	Q86XR8	500 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SRBD1	Q8N5C6	995 aa	Known RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SMG8	Q8ND04	991 aa	Known RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CSGALNACT1	Q8TDX6	532 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ASB16	Q96NS5	453 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	LZTS2	Q9BRK4	669 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ZNF577	Q9BSK1	485 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TTPAL	Q9BTX7	342 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	RNF39	Q9H2S5	420 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TBC1D22B	Q9NU19	505 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	APC2	O95996	2303 aa		10.98	□□□□□ -0.65
SPTAN1-231	ENST00000636337	MYO18B	Q8IUG5	2567 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	IGLV3-22	A0A075B6J6	115 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CCDC163	A0A0D9SF12	145 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	BCLAF3	A2AJT9	711 aa	Known RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	ARNTL	O00327	626 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TADA2A	O75478	443 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	FOS	P01100	380 aa	Predicted RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PLA2G2A	P14555	144 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	HOXA11	P31270	313 aa	Predicted RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SREBF1	P36956	1147 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	VIPR2	P41587	438 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	KPNA1	P52294	538 aa	Predicted RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	SIM1	P81133	766 aa	Predicted RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	UGCG	Q16739	394 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	MTERF2	Q49AM1	385 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	C20orf194	Q5TEA3	1177 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	LARP1B	Q659C4	914 aa	Known RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	C1orf228	Q6PIY5	440 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TXNDC11	Q6PKC3	985 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	CHCHD4	Q8N4Q1	142 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	LNX1	Q8TBB1	728 aa	Predicted RBP	10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	HASPIN	Q8TF76	798 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	DEPDC1B	Q8WUY9	529 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	PIK3R5	Q8WYR1	880 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	TCEAL4	Q96EI5	215 aa		10.97	□□□□□ -0.65
SPTAN1-231	ENST00000636337	MSANTD3	Q96H12	275 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms