RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 NRBP2Q9NSY0 501 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 STIM2Q9P246 746 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 RRN3P2A6NIE6 340 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 ZNF185O15231 689 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 ERLIN2O94905 339 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 C22orf31O95567 290 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 RAG1P15918 1043 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 KLRC1P26715 233 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 RPA1P27694 616 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 PTK7Q13308 1070 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 ZNF484Q5JVG2 852 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 SWT1Q5T5J6 900 aaKnown RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 CCDC181Q5TID7 509 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 CEP89Q96ST8 783 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 TUFT1Q9NNX1 390 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 CCL23P55773 120 aa16.77■□□□□ 0.28
CLN8-209ENST00000635970 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.28
CLN8-209ENST00000635970 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.28
CLN8-209ENST00000635970 BCAS4Q8TDM0 211 aa16.77■□□□□ 0.28
CLN8-209ENST00000635970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLN8-209ENST00000635970 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
CLN8-209ENST00000635970 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
CLN8-209ENST00000635970 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
CLN8-209ENST00000635970 SRRM3A6NNA2 597 aaPredicted RBP16.77■□□□□ 0.27
CLN8-209ENST00000635970 DKC1O60832 514 aaKnown RBP eCLIP16.77■□□□□ 0.27
CLN8-209ENST00000635970 ZMYND10O75800 440 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 LYPLA2O95372 231 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 KRT79Q5XKE5 535 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 IFT20Q8IY31 132 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 DNAJB3Q8WWF6 145 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 BADQ92934 168 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 SCLYQ96I15 445 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 CEP170P1Q96L14 293 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 LRRC1Q9BTT6 524 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 LUC7LQ9NQ29 371 aaKnown RBP16.77■□□□□ 0.27
CLN8-209ENST00000635970 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 FAM169AQ9Y6X4 670 aa16.77■□□□□ 0.27
CLN8-209ENST00000635970 SSU72P8A0A1W2PR75 194 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 TIMP1P01033 207 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 CTSHP09668 335 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 CKBP12277 381 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 THPOP40225 353 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 CCT5P48643 541 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 KIF11P52732 1056 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 VWA3BQ502W6 1294 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 CABP7Q86V35 215 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 MICALL1Q8N3F8 863 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 LRRC71Q8N4P6 559 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 PLIN2Q99541 437 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 TFR2Q9UP52 801 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 DUSP10Q9Y6W6 482 aa16.76■□□□□ 0.27
CLN8-209ENST00000635970 ZNF263O14978 683 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 CLCN3P51790 818 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 GNGT1P63211 74 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 TMEM62Q0P6H9 643 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 MAN2A1Q16706 1144 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 CFAP221Q4G0U5 840 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 ZNF618Q5T7W0 954 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 KCNK18Q7Z418 384 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 CD302Q8IX05 232 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 METTL13Q8N6R0 699 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 PCDHA2Q9Y5H9 948 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 PVALEFA0A1B0GWK0 134 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 MAGEA10P43363 369 aaPredicted RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 RARRES1P49788 294 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 DRP2Q13474 957 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 BFSP2Q13515 415 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 MICALCLQ6ZW33 695 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 MREGQ8N565 214 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 EIF1ADQ8N9N8 165 aaKnown RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 SYN2Q92777 582 aaPredicted RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 PPP1R16BQ96T49 567 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 NDST4Q9H3R1 872 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 GEMIN8Q9NWZ8 242 aaKnown RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 ARHGAP20Q9P2F6 1191 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 DMGDHQ9UI17 866 aaKnown RBP16.75■□□□□ 0.27
CLN8-209ENST00000635970 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
CLN8-209ENST00000635970 TET1Q8NFU7 2136 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 LAMA3Q16787 3333 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 GRID2IPA4D2P6 1211 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 E9PMD0 336 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 AKR1B10O60218 316 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 CSF2RAP15509 400 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 PLCG1P19174 1290 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 LRRC63Q05C16 580 aa16.74■□□□□ 0.27
CLN8-209ENST00000635970 GRB10Q13322 594 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms