RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 STYXL1Q9Y6J8 313 aa10.66□□□□□ -0.7
LINC00339-210ENST00000635675 PRRC2BQ5JSZ5 2229 aaKnown RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 A0A0B4J269 797 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ANKRD63C9JTQ0 380 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 GRM6O15303 877 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 GCNT3O95395 438 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 POMCP01189 267 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ITGB1P05556 798 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 GALTP07902 379 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 FOSL2P15408 326 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 IGFBP4P22692 258 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 HOXD13P35453 343 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 SCNN1GP51170 649 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 BCAR1P56945 870 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 DSC1Q08554 894 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 NOLC1Q14978 699 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 EPM2AIP1Q7L775 607 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 BICD1Q96G01 975 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ZNF558Q96NG5 402 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ACCSQ96QU6 501 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 IKZF4Q9H2S9 585 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
LINC00339-210ENST00000635675 LMCD1Q9NZU5 365 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 ANKFY1Q9P2R3 1169 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 DNAJB4Q9UDY4 337 aa10.65□□□□□ -0.7
LINC00339-210ENST00000635675 COL4A4P53420 1690 aaPredicted RBP10.65□□□□□ -0.71
LINC00339-210ENST00000635675 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 TISP43B9A030 160 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 PTGESO14684 152 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 MEFVO15553 781 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 FAM189A1O60320 539 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ZC3H11AO75152 810 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 FGF18O76093 207 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 PRPF6O94906 941 aaKnown RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ALDH2P05091 517 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 DNAJB1P25685 340 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ADSSP30520 456 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 PBX3P40426 434 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ALDH7A1P49419 539 aaKnown RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 OSTNP61366 133 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 DPYDQ12882 1025 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 CAMK1Q14012 370 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 XKR4Q5GH76 650 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 FAM26FQ5R3K3 315 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 COLGALT2Q8IYK4 626 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 THNSL1Q8IYQ7 743 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 SLC39A11Q8N1S5 342 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ZNF507Q8TCN5 953 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 MRPL38Q96DV4 380 aaKnown RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 TMEM175Q9BSA9 504 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 CCDC94Q9BW85 323 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 LMAN2LQ9H0V9 348 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 SPG21Q9NZD8 308 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
LINC00339-210ENST00000635675 TDRD15B5MCY1 1934 aaKnown RBP10.64□□□□□ -0.71
LINC00339-210ENST00000635675 TRIP11Q15643 1979 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 NT5C1B-RDH14C9J2C7 533 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 OGTO15294 1046 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 EIF3DO15371 548 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 NR1I2O75469 434 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SLC34A2O95436 690 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 CLTAP09496 248 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 PPM1AP35813 382 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 MATR3P43243 847 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SLC11A1P49279 550 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 UBE3AQ05086 875 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 GRIK3Q13003 919 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 PSMD2Q13200 908 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 NAB2Q15742 525 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 KYAT1Q16773 422 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SLC10A6Q3KNW5 377 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 KMT5BQ4FZB7 885 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SEZ6Q53EL9 994 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 ZBTB41Q5SVQ8 909 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 STXBP4Q6ZWJ1 553 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 TMEM173Q86WV6 379 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 SCFD1Q8WVM8 642 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 TIGD1Q96MW7 591 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 FAM193BQ96PV7 902 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 PPP1R10Q96QC0 940 aaKnown RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 RPS6KC1Q96S38 1066 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 TMEM206Q9H813 350 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms