RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TMEM200BQ69YZ2 307 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 TTLL5Q6EMB2 1281 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 SLFN12LQ6IEE8 588 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 TIGD7Q6NT04 549 aaPredicted RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CMTR2Q8IYT2 770 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CPXCR1Q8N123 301 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 NDUFAF2Q8N183 169 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CHCHD4Q8N4Q1 142 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CPA6Q8N4T0 437 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 AMER2Q8N7J2 671 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 PPHLN1Q8NEY8 458 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 Q8TCH9 128 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 JADE3Q92613 823 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 EDAQ92838 391 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CCDC47Q96A33 483 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 EAF2Q96CJ1 260 aaPredicted RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ANO3Q9BYT9 981 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CXorf56Q9H5V9 222 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ZIM2Q9NZV7 527 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ARHGAP20Q9P2F6 1191 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 EVLQ9UI08 416 aaPredicted RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ZFP69BQ9UJL9 534 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 HDAC9Q9UKV0 1011 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ZDHHC9Q9Y397 364 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 HS3ST3A1Q9Y663 406 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 MYPNQ86TC9 1320 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 A0A0A6YYK5 440 aaPredicted RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 KLRG2A4D1S0 409 aaPredicted RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 FIBPO43427 364 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 OPHN1O60890 802 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 KLHL18O94889 574 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 CNOT4O95628 575 aaKnown RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 KNG1P01042 644 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 APEX1P27695 318 aaKnown RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 RECQLP46063 649 aaPredicted RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 BCAR1P56945 870 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 SRSF2Q01130 221 aaKnown RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 UGT8Q16880 541 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.48□□□□□ -1.852e-7■■■■■ 45
PSPC1-208ENST00000635562 SLC4A8Q2Y0W8 1093 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 MIIPQ5JXC2 388 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 NXNQ6DKJ4 435 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 PPP4R3AQ6IN85 833 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 CFAP161Q6P656 301 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 CCDC62Q6P9F0 684 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 PGM2L1Q6PCE3 622 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 C16orf54Q6UWD8 224 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 RNF207Q6ZRF8 634 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 Q6ZUG5 572 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 BMP8AQ7Z5Y6 402 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 ANKRD13BQ86YJ7 626 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 HSCBQ8IWL3 235 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 TCEAL8Q8IYN2 117 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 NKAIN3Q8N8D7 197 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 PPP1R14CQ8TAE6 165 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 TSPEARQ8WU66 669 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 TGFBRAP1Q8WUH2 860 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 ATXN2LQ8WWM7 1075 aaKnown RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 RSAD2Q8WXG1 361 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 SKA1Q96BD8 255 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 AJUBAQ96IF1 538 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 RAX2Q96IS3 184 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 MPP4Q96JB8 637 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 TEKT5Q96M29 485 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 TACO1Q9BSH4 297 aaKnown RBP3.48□□□□□ -1.85
PSPC1-208ENST00000635562 SOX7Q9BT81 388 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 ZNF341Q9BYN7 854 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 KCTD10Q9H3F6 313 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 AASDHPPTQ9NRN7 309 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 MKS1Q9NXB0 559 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 PRSS50Q9UI38 385 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 GPR45Q9Y5Y3 372 aa3.48□□□□□ -1.85
PSPC1-208ENST00000635562 CUTAO60888 179 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SEC24DO94855 1032 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 LPLP06858 475 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 HNRNPCP07910 306 aaKnown RBP eCLIP3.47□□□□□ -1.851e-7■■□□□ 14
PSPC1-208ENST00000635562 IFIT2P09913 472 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 ZSCAN20P17040 1043 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 COMTP21964 271 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 MCM7P33993 719 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DDIT3P35638 169 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 GPR15P49685 360 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 ANTXR2P58335 489 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 IRX3P78415 501 aaPredicted RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CD83Q01151 205 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 FOXE3Q13461 319 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DCTN1Q14203 1278 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SEPT2Q15019 361 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 TOMM20Q15388 145 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 SMN1Q16637 294 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 MUM1Q2TAK8 710 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 ANO4Q32M45 955 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CCDC178Q5BJE1 867 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 TOR2AQ5JU69 321 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 WDR45BQ5MNZ6 344 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 DACT2Q5SW24 774 aa3.47□□□□□ -1.85
PSPC1-208ENST00000635562 CC2D1BQ5T0F9 858 aaKnown RBP3.47□□□□□ -1.85
PSPC1-208ENST00000635562 PHF19Q5T6S3 580 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms