RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 KLK14Q9P0G3 267 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 MTCL1Q9Y4B5 1905 aaKnown RBP17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 DSG1Q02413 1049 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 DSC1Q08554 894 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 ANGPT1Q15389 498 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 HACE1Q8IYU2 909 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 DTWD2Q8NBA8 298 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 ST13P5Q8NFI4 369 aaPredicted RBP17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 CMASQ8NFW8 434 aaPredicted RBP17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 CLUHO75153 1309 aa17.2■□□□□ 0.34
SNRNP48-203ENST00000634363 BMP15O95972 392 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 PRPHP41219 470 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 RESTQ13127 1097 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 CAPSQ13938 189 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 HAUS3Q68CZ6 603 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 CCDC105Q8IYK2 499 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 ADSSL1Q8N142 457 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 SLC44A3Q8N4M1 653 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 ASAP3Q8TDY4 903 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 MYADMQ96S97 322 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 RXFP1Q9HBX9 757 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
SNRNP48-203ENST00000634363 B4GALT5O43286 388 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 TADA2AO75478 443 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 NPTXRO95502 500 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 RPL17P18621 184 aaKnown RBP17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 USP41Q3LFD5 358 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 CYP26C1Q6V0L0 522 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 CHST7Q9NS84 486 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 WNT16Q9UBV4 365 aa17.18■□□□□ 0.34
SNRNP48-203ENST00000634363 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 TGM5O43548 720 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 DGAT1O75907 488 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 GLRA2P23416 452 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 ARL2P36404 184 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 AMHR2Q16671 573 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 GET4Q7L5D6 327 aaPredicted RBP17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 RNF168Q8IYW5 571 aaPredicted RBP17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 HSD17B14Q9BPX1 270 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 POLR3FQ9H1D9 316 aaPredicted RBP17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 PLEKHA4Q9H4M7 779 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 TUFT1Q9NNX1 390 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 ANKEF1Q9NU02 776 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 LRWD1Q9UFC0 647 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 STK24Q9Y6E0 443 aa17.17■□□□□ 0.34
SNRNP48-203ENST00000634363 LRRIQ4A6NIV6 560 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 EFEMP2O95967 443 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 LAMP2P13473 410 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 SF3A1Q15459 793 aaKnown RBP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 PRSS55Q6UWB4 352 aaPredicted RBP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 GSTCDQ8NEC7 633 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 EPS15L1Q9UBC2 864 aa17.16■□□□□ 0.34
SNRNP48-203ENST00000634363 VWA3AA6NCI4 1184 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 LYPLA2O95372 231 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 ZSCAN22P10073 491 aaPredicted RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 SRFP11831 508 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 CCT6AP40227 531 aaKnown RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 RARRES1P49788 294 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 GRIK3Q13003 919 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 PDIA5Q14554 519 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 IGSF22Q8N9C0 903 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms