RNA–Protein interactions for RNA: ENST00000631023.2

CLN3-240, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-240ENST00000631023 GALTP07902 379 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 SYKP43405 635 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 ASIC1P78348 528 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 GRIK3Q13003 919 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 ALCAMQ13740 583 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 NOLC1Q14978 699 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLN3-240ENST00000631023 ZC2HC1CQ53FD0 456 aaPredicted RBP22.67■■□□□ 1.22
CLN3-240ENST00000631023 SLC39A11Q8N1S5 342 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 MRPS27Q92552 414 aaKnown RBP22.67■■□□□ 1.22
CLN3-240ENST00000631023 ZBTB45Q96K62 511 aaPredicted RBP22.67■■□□□ 1.22
CLN3-240ENST00000631023 MIOSQ9NXC5 875 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 TBC1D7Q9P0N9 293 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 DNAJB4Q9UDY4 337 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 HPSEQ9Y251 543 aa22.67■■□□□ 1.22
CLN3-240ENST00000631023 PIGRP01833 764 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 MCL1Q07820 350 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 SKIV2LQ15477 1246 aaKnown RBP22.66■■□□□ 1.22
CLN3-240ENST00000631023 TPRNQ4KMQ1 711 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 PDE12Q6L8Q7 609 aaKnown RBP22.66■■□□□ 1.22
CLN3-240ENST00000631023 MAP4K3Q8IVH8 894 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 GSTCDQ8NEC7 633 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 MICAL1Q8TDZ2 1067 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 ACAP3Q96P50 834 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 NSUN3Q9H649 340 aaKnown RBP22.66■■□□□ 1.22
CLN3-240ENST00000631023 TLR9Q9NR96 1032 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 SERTAD1Q9UHV2 236 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 FAN1Q9Y2M0 1017 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 REV3LO60673 3130 aa22.66■■□□□ 1.22
CLN3-240ENST00000631023 FAM237AA0A1B0GTK4 181 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 NT5C1B-RDH14C9J2C7 533 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 ABLIM1O14639 778 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 GCNT3O95395 438 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 THP07101 528 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 HARSP12081 509 aaKnown RBP22.65■■□□□ 1.22
CLN3-240ENST00000631023 DNAJB1P25685 340 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 AFMP43652 599 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 SLC11A1P49279 550 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 BMS1Q14692 1282 aaKnown RBP22.65■■□□□ 1.22
CLN3-240ENST00000631023 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 FSIP1Q8NA03 581 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 PPP2R3CQ969Q6 453 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 CHMP5Q9NZZ3 219 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 EXOC7Q9UPT5 735 aa22.65■■□□□ 1.22
CLN3-240ENST00000631023 PDCD11Q14690 1871 aaKnown RBP22.65■■□□□ 1.22
CLN3-240ENST00000631023 ACTN4O43707 911 aaKnown RBP22.64■■□□□ 1.22
CLN3-240ENST00000631023 NDUFA8P51970 172 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 OSTNP61366 133 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 DSC1Q08554 894 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 COASYQ13057 564 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 CAMK1Q14012 370 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 KYAT1Q16773 422 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 SLFN12LQ6IEE8 588 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 STXBP4Q6ZWJ1 553 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 IGSF21Q96ID5 467 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 STK39Q9UEW8 545 aa22.64■■□□□ 1.22
CLN3-240ENST00000631023 PPP1R37O75864 691 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 CSPG5O95196 566 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 OR1G1P47890 313 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 UNC13DQ70J99 1090 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 CEP120Q8N960 986 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 ACCSQ96QU6 501 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 STRA6Q9BX79 667 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.63■■□□□ 1.21
CLN3-240ENST00000631023 NRP1O14786 923 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 B4GALT3O60512 393 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 L1TD1Q5T7N2 865 aaKnown RBP22.63■■□□□ 1.21
CLN3-240ENST00000631023 PAGE5Q96GU1 130 aa22.63■■□□□ 1.21
CLN3-240ENST00000631023 PVALEFA0A1B0GWK0 134 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 MYL1P05976 194 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 TUSC3Q13454 348 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 DDX53Q86TM3 631 aaKnown RBP22.62■■□□□ 1.21
CLN3-240ENST00000631023 SYCP3Q8IZU3 236 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 CCDC34Q96HJ3 373 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 COLEC11Q9BWP8 271 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 BLZF1Q9H2G9 400 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 NGRNQ9NPE2 291 aaKnown RBP22.62■■□□□ 1.21
CLN3-240ENST00000631023 ENTPD7Q9NQZ7 604 aa22.62■■□□□ 1.21
CLN3-240ENST00000631023 PTGESO14684 152 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 NCK2O43639 380 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 CLTAP09496 248 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 MYBP10242 640 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 ERVFC1P60507 584 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 POSTNQ15063 836 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 TCEAL5Q5H9L2 206 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 TMC7Q7Z402 723 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 MSTO1Q9BUK6 570 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 TMEM206Q9H813 350 aa22.61■■□□□ 1.21
CLN3-240ENST00000631023 PRG3Q9Y2Y8 225 aaPredicted RBP22.61■■□□□ 1.21
CLN3-240ENST00000631023 A0A0B4J269 797 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 OGTO15294 1046 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 IRS1P35568 1242 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 CASP5P51878 434 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 CUL4BQ13620 913 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 ALKAL1Q6UXT8 129 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 TMEM173Q86WV6 379 aaPredicted RBP22.6■■□□□ 1.21
CLN3-240ENST00000631023 GRAMD1CQ8IYS0 662 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 TCF25Q9BQ70 676 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 HAPLN2Q9GZV7 340 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 COG5Q9UP83 839 aa22.6■■□□□ 1.21
CLN3-240ENST00000631023 ZNF202O95125 648 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms