RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SPA17Q15506 151 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SURF1Q15526 300 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 TMEM240Q5SV17 173 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SFMBT2Q5VUG0 894 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 ZPBP2Q6X784 338 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 VPS36Q86VN1 386 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 RHPN2Q8IUC4 686 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 CCDC170Q8IYT3 715 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SYN2Q92777 582 aaPredicted RBP11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SPAG5Q96R06 1193 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 TCHPQ9BT92 498 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 PLCB1Q9NQ66 1216 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 FAM207AQ9NSI2 230 aaPredicted RBP11.01□□□□□ -0.65
LINC01943-202ENST00000628090 SPTLC3Q9NUV7 552 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
LINC01943-202ENST00000628090 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 MYO6Q9UM54 1294 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 AKT3Q9Y243 479 aa11.01□□□□□ -0.65
LINC01943-202ENST00000628090 BZW2Q9Y6E2 419 aaKnown RBP11.01□□□□□ -0.65
LINC01943-202ENST00000628090 IGKV6-21A0A0C4DH24 114 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 A6NJR5 290 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 EXTL3O43909 919 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 RPLP2P05387 115 aaKnown RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 MYL3P08590 195 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 KLRC1P26715 233 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 CASP4P49662 377 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 AP3M2P53677 418 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 CDK17Q00537 523 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 ITGA7Q13683 1181 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 SNRNP35Q16560 246 aaKnown RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 KYAT1Q16773 422 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 PTPN21Q16825 1174 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 ZNF365Q70YC5 407 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 TRIM50Q86XT4 487 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 RNF149Q8NC42 400 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 MYLIPQ8WY64 445 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 BSNDQ8WZ55 320 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 VWCEQ96DN2 955 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 CCDC42Q96M95 316 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 DNAJC7Q99615 494 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 INO80BQ9C086 356 aaPredicted RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 PRMT7Q9NVM4 692 aaPredicted RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 GCNT4Q9P109 453 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 AGO2Q9UKV8 859 aaKnown RBP11□□□□□ -0.65
LINC01943-202ENST00000628090 SIK3Q9Y2K2 1263 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 TELO2Q9Y4R8 837 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 NRCAMQ92823 1304 aa11□□□□□ -0.65
LINC01943-202ENST00000628090 NCOR1O75376 2440 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CLDN3O15551 220 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 PIGRP01833 764 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 PRKCBP05771 671 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 PBX2P40425 430 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 FMO5P49326 533 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CCL23P55773 120 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 PRPF4BQ13523 1007 aaKnown RBP10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CAPSQ13938 189 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 MFSD10Q14728 455 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 PCBP1Q15365 356 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01943-202ENST00000628090 GRIK4Q16099 956 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 MTHFD1LQ6UB35 978 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 RRAGAQ7L523 313 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 ZNF410Q86VK4 478 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 NLRP4Q96MN2 994 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CEP89Q96ST8 783 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CBWD1Q9BRT8 395 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 C16orf70Q9BSU1 422 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 MSTO1Q9BUK6 570 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 KIFC3Q9BVG8 833 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 NFKBIZQ9BYH8 718 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 RNPEPQ9H4A4 650 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 CXXC1Q9P0U4 656 aaPredicted RBP10.99□□□□□ -0.65
LINC01943-202ENST00000628090 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
LINC01943-202ENST00000628090 EVPLQ92817 2033 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
LINC01943-202ENST00000628090 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
LINC01943-202ENST00000628090 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 PMM2O15305 246 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
LINC01943-202ENST00000628090 B4GALT4O60513 344 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 TOM1L1O75674 476 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 CABYRO75952 493 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 ERLIN2O94905 339 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 C22orf31O95567 290 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 POLR2FP61218 127 aaKnown RBP10.98□□□□□ -0.65
LINC01943-202ENST00000628090 GRIN2CQ14957 1233 aa10.98□□□□□ -0.65
LINC01943-202ENST00000628090 ASIC2Q16515 512 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms