RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 FNDC1Q4ZHG4 1894 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 PLXNA4Q9HCM2 1894 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 EFEMP2O95967 443 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 STAG3L1P0CL83 205 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 RPA1P27694 616 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 IRS1P35568 1242 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 FOXK2Q01167 660 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TFF2Q03403 129 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 MBTD1Q05BQ5 628 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 LAMTOR4Q0VGL1 99 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 HYIQ5T013 277 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 CDCA2Q69YH5 1023 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 SLC24A5Q71RS6 500 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 FERMT3Q86UX7 667 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TMEM173Q86WV6 379 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 ECHDC2Q86YB7 292 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TMEM192Q8IY95 271 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 SIX5Q8N196 739 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 BCL7CQ8WUZ0 217 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 PRPF31Q8WWY3 499 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 PPM1EQ8WY54 764 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 MRPL38Q96DV4 380 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 POLR3CQ9BUI4 534 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 VN1R3Q9BXE9 311 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 CCDC113Q9H0I3 377 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 ELAC1Q9H777 363 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 BRMS1Q9HCU9 246 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TUFT1Q9NNX1 390 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 ANKEF1Q9NU02 776 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 TMEM161AQ9NX61 479 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 SUCLA2Q9P2R7 463 aaPredicted RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 DBR1Q9UK59 544 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 AKT3Q9Y243 479 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 GINS2Q9Y248 185 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 PPME1Q9Y570 386 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 PCDHGC5Q9Y5F6 944 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 COL4A3BPQ9Y5P4 624 aa8.51□□□□□ -1.05
TCF4-260ENST00000627685 PRRC2BQ5JSZ5 2229 aaKnown RBP8.51□□□□□ -1.05
TCF4-260ENST00000627685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 A0A0U1RQF3 1178 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 GPR182O15218 404 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 INPPL1O15357 1258 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 MEFVO15553 781 aaPredicted RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 TSPAN1O60635 241 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 ITGB1P05556 798 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 TMOD1P28289 359 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 CDC25AP30304 524 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 NOS2P35228 1153 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 BMPR1AP36894 532 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 LTBRP36941 435 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 TXLNAP40222 546 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 TECP42680 631 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 PTENP60484 403 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 CDC42EP1Q00587 391 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 KCNC3Q14003 757 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 PTPAQ15257 358 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 PTPROQ16827 1216 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 PAN2Q504Q3 1202 aaKnown RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 LYPD4Q6UWN0 246 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 AGMOQ6ZNB7 445 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 RHPN2Q8IUC4 686 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 FIBCD1Q8N539 461 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 SMG8Q8ND04 991 aaKnown RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 VN1R2Q8NFZ6 395 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 ZDHHC1Q8WTX9 485 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 CEP170P1Q96L14 293 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 MAP7D2Q96T17 732 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 PLVAPQ9BX97 442 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 NFKBIZQ9BYH8 718 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 LMAN2LQ9H0V9 348 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
TCF4-260ENST00000627685 CXCL16Q9H2A7 254 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 C1orf112Q9NSG2 853 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 ZDHHC3Q9NYG2 299 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 MTMR6Q9Y217 621 aa8.5□□□□□ -1.05
TCF4-260ENST00000627685 ABLIM1O14639 778 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 B4GALT5O43286 388 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 DKC1O60832 514 aaKnown RBP eCLIP8.49□□□□□ -1.05
TCF4-260ENST00000627685 ZNF623O75123 536 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 TBX10O75333 385 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 DKK1O94907 266 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 GLP2RO95838 553 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 ATP2B1P20020 1258 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 RFX1P22670 979 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 GTF2F1P35269 517 aaKnown RBP eCLIP8.49□□□□□ -1.05
TCF4-260ENST00000627685 PBX3P40426 434 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 PRPHP41219 470 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 MCM2P49736 904 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 KCNQ1P51787 676 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 SEC13P55735 322 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 DLX2Q07687 328 aaPredicted RBP8.49□□□□□ -1.05
TCF4-260ENST00000627685 GPM6BQ13491 265 aa8.49□□□□□ -1.05
TCF4-260ENST00000627685 TRIM29Q14134 588 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms