RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ZACNQ401N2 412 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 TRIM50Q86XT4 487 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 ZBTB8OSQ8IWT0 167 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 KRT222Q8N1A0 295 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 SLC20A1Q8WUM9 679 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 ZNF516Q92618 1163 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 ZBTB45Q96K62 511 aaPredicted RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 PBKQ96KB5 322 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 MRPL4Q9BYD3 311 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 SPDYE4A6NLX3 237 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 TBC1D8O95759 1140 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 C4BPAP04003 597 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 CXCR5P32302 372 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 HADHBP55084 474 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 VSNL1P62760 191 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 ARHGAP1Q07960 439 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 DRP2Q13474 957 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 LONRF2Q1L5Z9 754 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 TAPT1Q6NXT6 567 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 RPUSD2Q8IZ73 545 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 C2orf69Q8N8R5 385 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 EPS8L1Q8TE68 723 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 CGRRF1Q99675 332 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 SEPT11Q9NVA2 429 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 RBAKQ9NYW8 714 aaPredicted RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 SUCLA2Q9P2R7 463 aaPredicted RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 IVNS1ABPQ9Y6Y0 642 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 MSCO60682 206 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 RTN2O75298 545 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 GH1P01241 217 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 EDN1P05305 212 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 ZBTB48P10074 688 aaPredicted RBP23.78■■□□□ 1.4
PNKP-220ENST00000627232 TNNI1P19237 187 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 USP8P40818 1118 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 MATR3P43243 847 aaKnown RBP eCLIP23.78■■□□□ 1.4
PNKP-220ENST00000627232 ACOT2P49753 483 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 TFDP1Q14186 410 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 BEND6Q5SZJ8 279 aaPredicted RBP23.78■■□□□ 1.4
PNKP-220ENST00000627232 DNAAF5Q86Y56 855 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 PSMB7Q99436 277 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 SUGCTQ9HAC7 445 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 C1orf112Q9NSG2 853 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 STXBP5LQ9Y2K9 1186 aa23.78■■□□□ 1.4
PNKP-220ENST00000627232 ASAP2O43150 1006 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 TOM1L1O75674 476 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 SGPL1O95470 568 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 CHRNB2P17787 502 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 GRM1Q13255 1194 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 WDR44Q5JSH3 913 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 ZNF484Q5JVG2 852 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 SPRYD7Q5W111 196 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 NOP9Q86U38 636 aaKnown RBP23.77■■□□□ 1.4
PNKP-220ENST00000627232 RHOT2Q8IXI1 618 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 SLC35G2Q8TBE7 412 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 TATDN2Q93075 761 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 EMID1Q96A84 441 aaPredicted RBP23.77■■□□□ 1.4
PNKP-220ENST00000627232 PDE11AQ9HCR9 933 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 ERAP1Q9NZ08 941 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 ANKFY1Q9P2R3 1169 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 TRPC6Q9Y210 931 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 ZSWIM8A7E2V4 1837 aa23.77■■□□□ 1.4
PNKP-220ENST00000627232 TMCO5BA8MYB1 307 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 CLDN3O15551 220 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 CYP26A1O43174 497 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 HLA-DRAP01903 254 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 AP3M2P53677 418 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 MAMDC4Q6UXC1 1216 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 PEX26Q7Z412 305 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 PALB2Q86YC2 1186 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 UBE2Q2Q8WVN8 375 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 PARK7Q99497 189 aaKnown RBP23.76■■□□□ 1.39
PNKP-220ENST00000627232 FUT8Q9BYC5 575 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 ABCB6Q9NP58 842 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 TAS2R14Q9NYV8 317 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 CNTNAP2Q9UHC6 1331 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 ZNF236Q9UL36 1845 aa23.76■■□□□ 1.39
PNKP-220ENST00000627232 PRKCBP05771 671 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 PDE6CP51160 858 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 CDR2Q01850 454 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 MAPK6Q16659 721 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 GLE1Q53GS7 698 aaKnown RBP23.75■■□□□ 1.39
PNKP-220ENST00000627232 TDRD10Q5VZ19 366 aaKnown RBP23.75■■□□□ 1.39
PNKP-220ENST00000627232 BRSK2Q8IWQ3 736 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 RNF149Q8NC42 400 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 DHX38Q92620 1227 aaKnown RBP23.75■■□□□ 1.39
PNKP-220ENST00000627232 ACO2Q99798 780 aaKnown RBP23.75■■□□□ 1.39
PNKP-220ENST00000627232 SELENOOQ9BVL4 669 aa23.75■■□□□ 1.39
PNKP-220ENST00000627232 TULP1O00294 542 aaPredicted RBP23.74■■□□□ 1.39
PNKP-220ENST00000627232 SRGAP2CP0DJJ0 459 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 CYP11B1P15538 503 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 ABCB4P21439 1286 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 PIK3CAP42336 1068 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 WNT7BP56706 349 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 CBX1P83916 185 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 MAP9Q49MG5 647 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 DAAM2Q86T65 1068 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 NT5DC3Q86UY8 548 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 LRRC71Q8N4P6 559 aa23.74■■□□□ 1.39
PNKP-220ENST00000627232 MSL3Q8N5Y2 521 aaKnown RBP23.74■■□□□ 1.39
PNKP-220ENST00000627232 PCDHB18PQ96TA0 734 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms