RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 DDX1Q92499 740 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 TLCD1Q96CP7 247 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 TMEM109Q9BVC6 243 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 C17orf75Q9HAS0 396 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 OSGEPQ9NPF4 335 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 AMFRQ9UKV5 643 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 OTOFQ9HC10 1997 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ANK1P16157 1881 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 SFNP31947 248 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 CCT5P48643 541 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 CYP2J2P51589 502 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 VAMP7P51809 220 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 HMGCS2P54868 508 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 GNGT1P63211 74 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 DLG4P78352 724 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ZNF844Q08AG5 666 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 MTMR3Q13615 1198 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 VGLL4Q14135 290 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 PGM5Q15124 567 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ARHGAP44Q17R89 818 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ARHGEF19Q8IW93 802 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 PRPF38AQ8NAV1 312 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 U2AF1L4Q8WU68 220 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 LRRC45Q96CN5 670 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 C5orf60A6NFR6 353 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 TMEM110-MUSTN1A8MSY1 372 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 FOXN3O00409 490 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 RTN2O75298 545 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 USP2O75604 605 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ITGBL1O95965 494 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 KRT14P02533 472 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ITGA4P13612 1032 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 SCP2P22307 547 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 ADSSP30520 456 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 QARSP47897 775 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 JAK3P52333 1124 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 CST9Q5W186 159 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 KSR1Q8IVT5 923 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 EPS8L1Q8TE68 723 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 NAP1L3Q99457 506 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 AP1M1Q9BXS5 423 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 THAP2Q9H0W7 228 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 TAS2R14Q9NYV8 317 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 TMOD4Q9NZQ9 345 aa7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 LARSQ9P2J5 1176 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-244ENST00000627109 NFASCO94856 1347 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 ARHGEF35A5YM69 484 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 ATP2A1O14983 1001 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 CTNNA1P35221 906 aaKnown RBP7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 IGBP1P78318 339 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 SF3A3Q12874 501 aaKnown RBP eCLIP7.71□□□□□ -1.173e-7■■■□□ 16.9
CTNNA1-244ENST00000627109 DGKZQ13574 1117 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 HELQQ8TDG4 1101 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 BCAS4Q8TDM0 211 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 TMEM117Q9H0C3 514 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 EPN3Q9H201 632 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 ZNF112Q9UJU3 913 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 STYXL1Q9Y6J8 313 aa7.71□□□□□ -1.17
CTNNA1-244ENST00000627109 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 MYO1FO00160 1098 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 EBAG9O00559 213 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 NFIBO00712 420 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 TRIM49P0CI25 452 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 TRIM49CP0CI26 452 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 GBP1P32455 592 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 PPP4R4Q6NUP7 873 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 C6orf89Q6UWU4 347 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 ZDHHC24Q6UX98 284 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 DPH6Q7L8W6 267 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 DAAM2Q86T65 1068 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 MICALL1Q8N3F8 863 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 XXYLT1Q8NBI6 393 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 TMEM161BQ8NDZ6 487 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 CCDC26Q8TAB7 109 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 ALG3Q92685 438 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 CENPTQ96BT3 561 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 OPTNQ96CV9 577 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 C12orf42Q96LP6 360 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 RNPC3Q96LT9 517 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 AGBL1Q96MI9 1066 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 KREMEN1Q96MU8 473 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 FBXO28Q9NVF7 368 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 EMSYQ7Z589 1322 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 KRIT1O00522 736 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 NDUFAB1O14561 156 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 IRF6O14896 467 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 KIAA0754O94854 1291 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 ADRB2P07550 413 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 DNAJA1P31689 397 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 OAZ1P54368 228 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 UGCGQ16739 394 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 RNF187Q5TA31 235 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 ZNF746Q6NUN9 644 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 SLC39A4Q6P5W5 647 aa7.71□□□□□ -1.18
CTNNA1-244ENST00000627109 MIER3Q7Z3K6 550 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms