RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 SASS6Q6UVJ0 657 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 HSPBP1Q9NZL4 362 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 CLIC2O15247 247 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 NR3C1P04150 777 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 CCDC192P0DO97 292 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 GRM5P41594 1212 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 AGMOQ6ZNB7 445 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 DEFB123Q8N688 67 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 CXorf38Q8TB03 319 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 FTHL17Q9BXU8 183 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 EXOC7Q9UPT5 735 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 IPPQ9Y573 584 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 TMEM265A0A087WTH1 108 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ECHDC2Q86YB7 292 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 TMEM199Q8N511 208 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ADAM2Q99965 735 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 NXF3Q9H4D5 531 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 IKBKBO14920 756 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF500O60304 480 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ELAC1Q9H777 363 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 CBX8Q9HC52 389 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 PCDHB2Q9Y5E7 798 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ERLIN2O94905 339 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 NPTXRO95502 500 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 LINC00271P0C7V0 271 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ACRP10323 421 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 LIG4P49917 911 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ENPEPQ07075 957 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 ZBTB6Q15916 424 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 DCAF4L1Q3SXM0 396 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 DEFB128Q7Z7B8 93 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 HERVK_113Q902F9 699 aa11.54□□□□□ -0.56
KCNMA1-225ENST00000626620 PTPRJQ12913 1337 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 PSMA7O14818 248 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 OGTO15294 1046 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 EXTL3O43909 919 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 STX17P56962 302 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 FPGSQ05932 587 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SEZ6Q53EL9 994 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SPATA1Q5VX52 437 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SLFN12LQ6IEE8 588 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SEPT8Q92599 483 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 HES2Q9Y543 173 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CLDN3O15551 220 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 OFD1O75665 1012 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 WDR5P61964 334 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SLC24A5Q71RS6 500 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 FILIP1Q7Z7B0 1213 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF689Q96CS4 500 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CEP63Q96MT8 703 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SCLT1Q96NL6 688 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 ATG2AQ2TAZ0 1938 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 KIF20AO95235 890 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 CXXC1Q9P0U4 656 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 TSC2P49815 1807 aa11.53□□□□□ -0.56
KCNMA1-225ENST00000626620 NLRC5Q86WI3 1866 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 ABHD14A-ACY1A0A1B0GW23 586 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 FKBP3Q00688 224 aaKnown RBP11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF365Q70YC5 407 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 ZBTB33Q86T24 672 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF516Q92618 1163 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 SNX27Q96L92 541 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 MKNK1Q9BUB5 465 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 C1orf112Q9NSG2 853 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 MIOSQ9NXC5 875 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 CNTN3Q9P232 1028 aa11.52□□□□□ -0.56
KCNMA1-225ENST00000626620 PTGESO14684 152 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms