RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 EPOPA6NHQ4 379 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 DLL1O00548 723 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 ASAP2O43150 1006 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 DGKIO75912 1065 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 SLITRK3O94933 977 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 STBD1O95210 358 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 RB1P06400 928 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 OR52Z1P0C646 297 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 DARSP14868 501 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 GJB2P29033 226 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 BMPR1AP36894 532 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 TECP42680 631 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 CHRNA4P43681 627 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 NPEPPSP55786 919 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 MRPS5P82675 430 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 SPIRE1Q08AE8 756 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 AAK1Q2M2I8 961 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 PAN2Q504Q3 1202 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 PLA2G4FQ68DD2 849 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 SYT9Q86SS6 491 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 CMTR2Q8IYT2 770 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 ABI1Q8IZP0 508 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 LINC01465Q8N7H1 131 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 PSPC1Q8WXF1 523 aaKnown RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 NLRP4Q96MN2 994 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 MTMR9Q96QG7 549 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 SLC30A3Q99726 388 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 C11orf84Q9BUA3 381 aaPredicted RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 RAB34Q9BZG1 259 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 TSPAN10Q9H1Z9 355 aaPredicted RBP7.12□□□□□ -1.27
TCF4-249ENST00000625716 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 CHST12Q9NRB3 414 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 DACT1Q9NYF0 836 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 THEGQ9P2T0 379 aa7.12□□□□□ -1.27
TCF4-249ENST00000625716 A0A087WZ62 844 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TBKBP1A7MCY6 615 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 H3BNC9 293 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 RBAK-RBAKDNI3L0D1 243 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ATP9BO43861 1147 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 LYPLA2O95372 231 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 FURINP09958 794 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 SRGAP2CP0DJJ0 459 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
TCF4-249ENST00000625716 FGFR4P22455 802 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 U2AF2P26368 475 aaKnown RBP eCLIP7.11□□□□□ -1.27
TCF4-249ENST00000625716 NCBP1Q09161 790 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 TFDP1Q14186 410 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 MXD4Q14582 209 aaPredicted RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 EMC2Q15006 297 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 HAUS3Q68CZ6 603 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TWF2Q6IBS0 349 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 CATSPER4Q7RTX7 472 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 SPRED2Q7Z698 418 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 RNF169Q8NCN4 708 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TET1Q8NFU7 2136 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ATXN2LQ8WWM7 1075 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 PRPF31Q8WWY3 499 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 LINC01599Q8WXQ3 324 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TMEM143Q96AN5 459 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ZNF689Q96CS4 500 aaPredicted RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 MRPL38Q96DV4 380 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 NACC1Q96RE7 527 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 HSD17B14Q9BPX1 270 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 FDXACB1Q9BRP7 624 aaPredicted RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 PLVAPQ9BX97 442 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 DHX33Q9H6R0 707 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 ELAC1Q9H777 363 aaKnown RBP7.11□□□□□ -1.27
TCF4-249ENST00000625716 TUFT1Q9NNX1 390 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ANKEF1Q9NU02 776 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 TMEM161AQ9NX61 479 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 LRWD1Q9UFC0 647 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ZNF232Q9UNY5 417 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 COG5Q9UP83 839 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 HCN4Q9Y3Q4 1203 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 COL4A3BPQ9Y5P4 624 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 LAMA3Q16787 3333 aa7.11□□□□□ -1.27
TCF4-249ENST00000625716 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 ELOA3DA6NLF2 546 aaPredicted RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 C9IYK1 514 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 LAD1O00515 517 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 ZBTB39O15060 712 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 MGEA5O60502 916 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 LPXNO60711 386 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 CSDE1O75534 798 aaKnown RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 ERLIN2O94905 339 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 EOMESO95936 686 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 CCT6AP40227 531 aaKnown RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 FAM189BP81408 668 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 LAMTOR4Q0VGL1 99 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 DRP2Q13474 957 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 PDIA5Q14554 519 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 DSC3Q14574 896 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 ELOA3BQ3SY89 546 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 TIGD5Q53EQ6 642 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms