RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ZDHHC9Q9Y397 364 aa7.95□□□□□ -1.14
NPLOC4-221ENST00000625705 RBM19Q9Y4C8 960 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-221ENST00000625705 LCHNA4D1U4 455 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 C9IYK1 514 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 POLR2DO15514 142 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 B4GALT5O43286 388 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 NPTXRO95502 500 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 PLS3P13797 630 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 FOSL2P15408 326 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 ARF4P18085 180 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 IGFBP4P22692 258 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 NPTX2P47972 431 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 GATMP50440 423 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 ASIC1P78348 528 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 TAP1Q03518 808 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 DSC3Q14574 896 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 ZNF568Q3ZCX4 644 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CDCA2Q69YH5 1023 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 SLC27A1Q6PCB7 646 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 SHC4Q6S5L8 630 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 RTN4RL1Q86UN2 441 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 BPHLQ86WA6 291 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CDR2LQ86X02 465 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 FAM178BQ8IXR5 827 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CCDC65Q8IXS2 484 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CMTR2Q8IYT2 770 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 MICALL1Q8N3F8 863 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CNNM3Q8NE01 707 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 STAMQ92783 540 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CCDC51Q96ER9 411 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 PRIMPOLQ96LW4 560 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CDK15Q96Q40 435 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 TGS1Q96RS0 853 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 RPS6KC1Q96S38 1066 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 MRPL4Q9BYD3 311 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 PRDM12Q9H4Q4 367 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 ELAC1Q9H777 363 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 BLOC1S4Q9NUP1 217 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 ANKFY1Q9P2R3 1169 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 RCOR1Q9UKL0 485 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 RWDD3Q9Y3V2 267 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 PCDHB2Q9Y5E7 798 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 CNTNAP2Q9UHC6 1331 aa7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 MKI67P46013 3256 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-221ENST00000625705 A0A087X0B3 334 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 A0A0U1RQF3 1178 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 LINC01553A4QN01 128 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 WIPF1O43516 503 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 TRAK2O60296 914 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 DGKIO75912 1065 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 CSPG5O95196 566 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 EOMESO95936 686 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 ITGA4P13612 1032 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 PFKFB1P16118 471 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 GAP43P17677 238 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 ABCD1P33897 745 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 SYKP43405 635 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 AFMP43652 599 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 LIG4P49917 911 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 HTRA4P83105 476 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MAPK7Q13164 816 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 ATF7IP2Q5U623 682 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 RESP18Q5W5W9 173 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 ADALQ6DHV7 355 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 STXBP4Q6ZWJ1 553 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 SFR1Q86XK3 245 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 DAW1Q8N136 415 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 LRRC43Q8N309 656 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 FSIP1Q8NA03 581 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MYLIPQ8WY64 445 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MRPS27Q92552 414 aaKnown RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 LPPQ93052 612 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 CCDC47Q96A33 483 aaKnown RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 SAMD11Q96NU1 681 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 FAM193BQ96PV7 902 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MRPL9Q9BYD2 267 aaKnown RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 TMEM117Q9H0C3 514 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 TNMDQ9H2S6 317 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MRPL44Q9H9J2 332 aaKnown RBP7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 MAGEF1Q9HAY2 307 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 PANK4Q9NVE7 773 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 PARP2Q9UGN5 583 aa7.93□□□□□ -1.14
NPLOC4-221ENST00000625705 COL4A4P53420 1690 aaPredicted RBP7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 NLRC5Q86WI3 1866 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 A0A1B0GVL5 298 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 ACKR2O00590 384 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 HNRNPDLO14979 420 aaKnown RBP7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 ZC3H11AO75152 810 aaKnown RBP eCLIP7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 GCNT3O95395 438 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 LAG3P18627 525 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 SCP2P22307 547 aa7.92□□□□□ -1.14
NPLOC4-221ENST00000625705 CMA1P23946 247 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms