RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CCDC181Q5TID7 509 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 WDR49Q8IV35 697 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 BRSK2Q8IWQ3 736 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 RNF149Q8NC42 400 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 U2AF1L4Q8WU68 220 aaKnown RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 TAF4BQ92750 862 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 FAXDC2Q96IV6 333 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 OSBPL9Q96SU4 736 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.64■□□□□ 0.41
LDB3-208ENST00000623007 AJAP1Q9UKB5 411 aaPredicted RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 V9GYY5 206 aaPredicted RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 NCANO14594 1321 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 TARSL2A2RTX5 802 aaKnown RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 OGTO15294 1046 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 HUNKP57058 714 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 MCL1Q07820 350 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 PCBP1Q15365 356 aaKnown RBP eCLIP17.63■□□□□ 0.41
LDB3-208ENST00000623007 EFCAB12Q6NXP0 572 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 HNRNPLLQ8WVV9 542 aaKnown RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 ACO2Q99798 780 aaKnown RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 TARS2Q9BW92 718 aaKnown RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 FZD8Q9H461 694 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 PUF60Q9UHX1 559 aaKnown RBP17.63■□□□□ 0.41
LDB3-208ENST00000623007 TFR2Q9UP52 801 aa17.63■□□□□ 0.41
LDB3-208ENST00000623007 MCM3APO60318 1980 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 PALMO75781 387 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
LDB3-208ENST00000623007 PTENP60484 403 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 TNFAIP2Q03169 654 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 PRPF4BQ13523 1007 aaKnown RBP17.62■□□□□ 0.41
LDB3-208ENST00000623007 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 DGKDQ16760 1214 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 MEI1Q5TIA1 1274 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 MPZL3Q6UWV2 235 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 ARHGEF19Q8IW93 802 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 HELQQ8TDG4 1101 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 PBKQ96KB5 322 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 TCHPQ9BT92 498 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 SELENOOQ9BVL4 669 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 R3HDMLQ9H3Y0 253 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 ANKFY1Q9P2R3 1169 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 RAB21Q9UL25 225 aa17.62■□□□□ 0.41
LDB3-208ENST00000623007 ZEB2O60315 1214 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 RTN2O75298 545 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 C4BPAP04003 597 aaKnown RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 FBXO38Q6PIJ6 1188 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 RHPN2Q8IUC4 686 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 GLYCTKQ8IVS8 523 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 TAS1R2Q8TE23 839 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 ISCUQ9H1K1 167 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 PDGFCQ9NRA1 345 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 TNFSF13BQ9Y275 285 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 BUB1O43683 1085 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 LRRN2O75325 713 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 IL18RAPO95256 599 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 C22orf31O95567 290 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 PIK3CAP42336 1068 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 GALCP54803 685 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 NLRP11P59045 1033 aaKnown RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 NAA30Q147X3 362 aaPredicted RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 RPS6KA1Q15418 735 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 MAP9Q49MG5 647 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 GLE1Q53GS7 698 aaKnown RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 CRELD2Q6UXH1 353 aaPredicted RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 TRIM50Q86XT4 487 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 LNX1Q8TBB1 728 aaPredicted RBP17.61■□□□□ 0.41
LDB3-208ENST00000623007 EPS8L1Q8TE68 723 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 SOCS4Q8WXH5 440 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 TRIM11Q96F44 468 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 TLR10Q9BXR5 811 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 Q9Y3F1 56 aa17.61■□□□□ 0.41
LDB3-208ENST00000623007 H3BRB1 525 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 SRGAP2CP0DJJ0 459 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 PROZP22891 400 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 BIRC3Q13489 604 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 WDR93Q6P2C0 686 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 TRIM72Q6ZMU5 477 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 SLFN11Q7Z7L1 901 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 ZNF410Q86VK4 478 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 CREG2Q8IUH2 290 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 METTL13Q8N6R0 699 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 LRRN4CLQ8ND94 238 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 ZSWIM2Q8NEG5 633 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 TPCN2Q8NHX9 752 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 COPS5Q92905 334 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 PTPN18Q99952 460 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 CCDC94Q9BW85 323 aaPredicted RBP17.6■□□□□ 0.41
LDB3-208ENST00000623007 TUT1Q9H6E5 874 aaKnown RBP17.6■□□□□ 0.41
LDB3-208ENST00000623007 HDAC6Q9UBN7 1215 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 SALL4Q9UJQ4 1053 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms