RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 TMEM60Q9H2L4 133 aa26.34■■□□□ 1.81
CPSF1-214ENST00000622776 WNT16Q9UBV4 365 aa26.34■■□□□ 1.81
CPSF1-214ENST00000622776 TADA2AO75478 443 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 CFHP08603 1231 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 RPL17P18621 184 aaKnown RBP26.33■■□□□ 1.81
CPSF1-214ENST00000622776 CREMQ03060 361 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 NXPE3Q969Y0 559 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 PRIMPOLQ96LW4 560 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 PRKD2Q9BZL6 878 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 PRMT7Q9NVM4 692 aaPredicted RBP26.33■■□□□ 1.81
CPSF1-214ENST00000622776 CACNG4Q9UBN1 327 aa26.33■■□□□ 1.81
CPSF1-214ENST00000622776 JAK2O60674 1132 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 TRIM29Q14134 588 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 HSP90AA2PQ14568 343 aaPredicted RBP26.32■■□□□ 1.8
CPSF1-214ENST00000622776 DTWD2Q8NBA8 298 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 MCPH1Q8NEM0 835 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 NKD2Q969F2 451 aaPredicted RBP26.32■■□□□ 1.8
CPSF1-214ENST00000622776 PAAF1Q9BRP4 392 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 FZD8Q9H461 694 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 TUFT1Q9NNX1 390 aa26.32■■□□□ 1.8
CPSF1-214ENST00000622776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.32■■□□□ 1.8
CPSF1-214ENST00000622776 DOCK6Q96HP0 2047 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 KRBA1A5PL33 1030 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 ATP2B1P20020 1258 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 TUSC3Q13454 348 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 FAM187BQ17R55 369 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 RTP2Q5QGT7 225 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 CDCA2Q69YH5 1023 aaPredicted RBP26.31■■□□□ 1.8
CPSF1-214ENST00000622776 PRSS55Q6UWB4 352 aaPredicted RBP26.31■■□□□ 1.8
CPSF1-214ENST00000622776 CATSPER3Q86XQ3 398 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 ZBTB8OSQ8IWT0 167 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 SNX27Q96L92 541 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 SF3B1O75533 1304 aaKnown RBP eCLIP26.31■■□□□ 1.8
CPSF1-214ENST00000622776 WDR87Q6ZQQ6 2873 aa26.31■■□□□ 1.8
CPSF1-214ENST00000622776 STK25O00506 426 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 ZMYND10O75800 440 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 SRFP11831 508 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 LAMP2P13473 410 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 ANGPT1Q15389 498 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 NACC1Q96RE7 527 aa26.3■■□□□ 1.8
CPSF1-214ENST00000622776 CASTOR2A6NHX0 329 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 TTLL13PA6NNM8 815 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 MED24O75448 989 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 MCM7P33993 719 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 POTEGQ6S5H5 508 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 GET4Q7L5D6 327 aaPredicted RBP26.29■■□□□ 1.8
CPSF1-214ENST00000622776 HASPINQ8TF76 798 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 C2orf40Q9H1Z8 148 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 PDZD7Q9H5P4 517 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 DMDP11532 3685 aa26.29■■□□□ 1.8
CPSF1-214ENST00000622776 PTGESO14684 152 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 N4BP3O15049 544 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 BSNDQ8WZ55 320 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 TTPALQ9BTX7 342 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 POLR3CQ9BUI4 534 aaPredicted RBP26.28■■□□□ 1.8
CPSF1-214ENST00000622776 SNTG2Q9NY99 539 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 CA14Q9ULX7 337 aa26.28■■□□□ 1.8
CPSF1-214ENST00000622776 ANHXE9PGG2 379 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 THP07101 528 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 RFX1P22670 979 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 PRPF4BQ13523 1007 aaKnown RBP26.27■■□□□ 1.8
CPSF1-214ENST00000622776 TMEM132AQ24JP5 1023 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 FAM171A1Q5VUB5 890 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 PIK3R5Q8WYR1 880 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 CLSTN3Q9BQT9 956 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 FBXW11Q9UKB1 542 aa26.27■■□□□ 1.8
CPSF1-214ENST00000622776 RECQL4O94761 1208 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 KIF4AO95239 1232 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 NEK4P51957 841 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 HTR4Q13639 388 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 MAPK6Q16659 721 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 PADI6Q6TGC4 694 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 CEP57Q86XR8 500 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 LNX1Q8TBB1 728 aaPredicted RBP26.26■■□□□ 1.79
CPSF1-214ENST00000622776 GPR152Q8TDT2 470 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 CXCL16Q9H2A7 254 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 TBC1D17Q9HA65 648 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 USP20Q9Y2K6 914 aa26.26■■□□□ 1.79
CPSF1-214ENST00000622776 ACKR2O00590 384 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 PRKCBP05771 671 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 CYP11B2P19099 503 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 FSHRP23945 695 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 GUCY1B3Q02153 619 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 SAFBQ15424 915 aaKnown RBP eCLIP26.25■■□□□ 1.79
CPSF1-214ENST00000622776 NAB2Q15742 525 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 PSMD5Q16401 504 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 NOSTRINQ8IVI9 506 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 ADPGKQ9BRR6 497 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 CCDC113Q9H0I3 377 aa26.25■■□□□ 1.79
CPSF1-214ENST00000622776 ZFP37Q9Y6Q3 630 aaPredicted RBP26.25■■□□□ 1.79
CPSF1-214ENST00000622776 ZNF292O60281 2723 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ARHGEF35A5YM69 484 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 HNRNPA1P09651 372 aaKnown RBP eCLIP26.24■■□□□ 1.79
CPSF1-214ENST00000622776 LIG1P18858 919 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 RPA1P27694 616 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 NAMPTP43490 491 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ST3GAL1Q11201 340 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 ELAVL2Q12926 359 aaKnown RBP26.24■■□□□ 1.79
CPSF1-214ENST00000622776 LIN9Q5TKA1 542 aa26.24■■□□□ 1.79
CPSF1-214ENST00000622776 EEF1DP3Q658K8 133 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms