RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
TARDBP-225ENST00000621715 CPLX2Q6PUV4 134 aaKnown RBP18.59■□□□□ 0.57
TARDBP-225ENST00000621715 CYP26C1Q6V0L0 522 aa18.59■□□□□ 0.57
TARDBP-225ENST00000621715 STAMQ92783 540 aa18.59■□□□□ 0.57
TARDBP-225ENST00000621715 FGF14Q92915 247 aa18.59■□□□□ 0.57
TARDBP-225ENST00000621715 POLR3FQ9H1D9 316 aaPredicted RBP18.59■□□□□ 0.57
TARDBP-225ENST00000621715 FNIP2Q9P278 1114 aa18.59■□□□□ 0.57
TARDBP-225ENST00000621715 PTGESO14684 152 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 MARCH6O60337 910 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 ZMYND10O75800 440 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 KIF4AO95239 1232 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 ID4P47928 161 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 PCBP1Q15365 356 aaKnown RBP eCLIP18.58■□□□□ 0.56
TARDBP-225ENST00000621715 PARM1Q6UWI2 310 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 MAEAQ7L5Y9 396 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 GRASPQ7Z6J2 395 aaPredicted RBP18.58■□□□□ 0.56
TARDBP-225ENST00000621715 SLFN12Q8IYM2 578 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 MAML2Q8IZL2 1156 aaPredicted RBP18.58■□□□□ 0.56
TARDBP-225ENST00000621715 HDAC7Q8WUI4 952 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 CLSTN3Q9BQT9 956 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 NFKBIZQ9BYH8 718 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 TRIM6Q9C030 488 aaPredicted RBP18.58■□□□□ 0.56
TARDBP-225ENST00000621715 PLEKHA4Q9H4M7 779 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 PIDD1Q9HB75 910 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 ARHGEF3Q9NR81 526 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 ANKEF1Q9NU02 776 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 ZDHHC7Q9NXF8 308 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 MIA3Q5JRA6 1907 aa18.58■□□□□ 0.56
TARDBP-225ENST00000621715 CASTOR2A6NHX0 329 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 USO1O60763 962 aaKnown RBP18.57■□□□□ 0.56
TARDBP-225ENST00000621715 DGAT1O75907 488 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 GRIK3Q13003 919 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 TFDP1Q14186 410 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 HSP90AA2PQ14568 343 aaPredicted RBP18.57■□□□□ 0.56
TARDBP-225ENST00000621715 NAB2Q15742 525 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 SLC27A1Q6PCB7 646 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 POTEHQ6S545 545 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 BSNDQ8WZ55 320 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 MTMR9Q96QG7 549 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 TMEM60Q9H2L4 133 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 TTC12Q9H892 705 aaPredicted RBP18.57■□□□□ 0.56
TARDBP-225ENST00000621715 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
TARDBP-225ENST00000621715 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 FBXW11Q9UKB1 542 aa18.57■□□□□ 0.56
TARDBP-225ENST00000621715 PATJQ8NI35 1801 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 NCOR2Q9Y618 2525 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 EPB41L2O43491 1005 aaKnown RBP18.56■□□□□ 0.56
TARDBP-225ENST00000621715 SPATA31C1P0DKV0 1188 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 FOSBP53539 338 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 GPC5P78333 572 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 FOXK2Q01167 660 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 PHLDB3Q6NSJ2 640 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 LNX1Q8TBB1 728 aaPredicted RBP18.56■□□□□ 0.56
TARDBP-225ENST00000621715 RMDN1Q96DB5 314 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 SLC2A4RGQ9NR83 387 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.56■□□□□ 0.56
TARDBP-225ENST00000621715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.56■□□□□ 0.56
TARDBP-225ENST00000621715 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
TARDBP-225ENST00000621715 BTBD18B2RXH4 712 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 TADA2AO75478 443 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 CDKL5O76039 1030 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 C1RP00736 705 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 SP9P0CG40 484 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 FSHRP23945 695 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 KRT2P35908 639 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 TXKP42681 527 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 CALCRLQ16602 461 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 CDCA2Q69YH5 1023 aaPredicted RBP18.55■□□□□ 0.56
TARDBP-225ENST00000621715 DCLRE1AQ6PJP8 1040 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 GPR65Q8IYL9 337 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 ITFG1Q8TB96 612 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 NXPE3Q969Y0 559 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 NAP1L4Q99733 375 aaKnown RBP18.55■□□□□ 0.56
TARDBP-225ENST00000621715 PDZD7Q9H5P4 517 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 HCFC1R1Q9NWW0 138 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 SNTG2Q9NY99 539 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 DPP7Q9UHL4 492 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 SIT1Q9Y3P8 196 aa18.55■□□□□ 0.56
TARDBP-225ENST00000621715 MTF2Q9Y483 593 aaPredicted RBP18.55■□□□□ 0.56
TARDBP-225ENST00000621715 LRRIQ4A6NIV6 560 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 CCL16O15467 120 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 NR1I2O75469 434 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
TARDBP-225ENST00000621715 LMNAP02545 664 aaKnown RBP18.54■□□□□ 0.56
TARDBP-225ENST00000621715 NCBP1Q09161 790 aaKnown RBP18.54■□□□□ 0.56
TARDBP-225ENST00000621715 TUSC3Q13454 348 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 FAM171A1Q5VUB5 890 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 EEF1DP3Q658K8 133 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 CD300LGQ6UXG3 332 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 RSPO2Q6UXX9 243 aaPredicted RBP18.54■□□□□ 0.56
TARDBP-225ENST00000621715 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 CEP57Q86XR8 500 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 DCLK2Q8N568 766 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 PJA1Q8NG27 643 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 KCNG4Q8TDN1 519 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 FZD8Q9H461 694 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 POLD4Q9HCU8 107 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 ZMYM2Q9UBW7 1377 aa18.54■□□□□ 0.56
TARDBP-225ENST00000621715 SF3B1O75533 1304 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms