RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 RPUSD2Q8IZ73 545 aaKnown RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 PPM1KQ8N3J5 372 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 EIF1ADQ8N9N8 165 aaKnown RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 MAGEC3Q8TD91 643 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 STMN2Q93045 179 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 L3MBTL3Q96JM7 780 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 TRIM7Q9C029 511 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 TXNDC16Q9P2K2 825 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 IVNS1ABPQ9Y6Y0 642 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 KDM3AQ9Y4C1 1321 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 CACNA1SQ13698 1873 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 PHF2O75151 1096 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ASNSP08243 561 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ALAS1P13196 640 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CD19P15391 556 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 VCAM1P19320 739 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CCND1P24385 295 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 YY1P25490 414 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PSMC2P35998 433 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PPP2R5DQ14738 602 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 QRICH1Q2TAL8 776 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DPY19L2P1Q6NXN4 242 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CENPTQ96BT3 561 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 AMNQ9BXJ7 453 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ANO3Q9BYT9 981 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ALG13Q9NP73 1137 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ARL2BPQ9Y2Y0 163 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RABGAP1Q9Y3P9 1069 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ASTN1O14525 1302 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TRPM3Q9HCF6 1732 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 GOLGA8IPA6NC78 632 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 GOLGA8JA6NMD2 632 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TGFB1I1O43294 461 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 GH2P01242 217 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TMEM253P0C7T8 217 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 BMP3P12645 472 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PRKCIP41743 596 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ABL2P42684 1182 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SLC8A3P57103 927 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 KRT17Q04695 432 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PPATQ06203 517 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 HHATQ5VTY9 493 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DCUN1D2Q6PH85 259 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 C4orf33Q8N1A6 199 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PPFIBP2Q8ND30 876 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 NAF1Q96HR8 494 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 NUDCD1Q96RS6 583 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 STK33Q9BYT3 514 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TXLNGYQ9BZA5 131 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 METTL14Q9HCE5 456 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TYW1Q9NV66 732 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DCTN4Q9UJW0 460 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 FAM187AA6NFU0 413 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RASA4BC9J798 803 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 EML1O00423 815 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PDXKO00764 312 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RASA4O43374 803 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SORBS3O60504 671 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ECEL1O95672 775 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 GSTA1P08263 222 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RARGP13631 454 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CHRNA3P32297 505 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 COILP38432 576 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PTGIRP43119 386 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ARHGAP4P98171 946 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 MGAT5Q09328 741 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DHX34Q14147 1143 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SEPT2Q15019 361 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ODR4Q5SWX8 454 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ARMC3Q5W041 872 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 FAM178BQ8IXR5 827 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SEC14L1Q92503 715 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 MCUR1Q96AQ8 359 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 VPS37BQ9H9H4 285 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CHST7Q9NS84 486 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SLC5A4Q9NY91 659 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 POLLQ9UGP5 575 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TTC7AQ9ULT0 858 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 MRPL11Q9Y3B7 192 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 KAT6AQ92794 2004 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 COL18A1P39060 1754 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DPPA5A6NC42 116 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 BTNL10A8MVZ5 291 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 FAM86B1E9PN63 330 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ZBTB5O15062 677 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CYP26A1O43174 497 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 FAM86B2P0C5J1 330 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 SPATA31C1P0DKV0 1188 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 JAM2P57087 298 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF543Q08ER8 600 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 BNIP1Q12981 228 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms