RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 OTUD6AQ7L8S5 288 aa16.93■□□□□ 0.3
SEMA3B-214ENST00000619119 SESTD1Q86VW0 696 aa16.93■□□□□ 0.3
SEMA3B-214ENST00000619119 GDAP1Q8TB36 358 aa16.93■□□□□ 0.3
SEMA3B-214ENST00000619119 FMO2Q99518 471 aa16.93■□□□□ 0.3
SEMA3B-214ENST00000619119 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 CNGA2Q16280 664 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 PRAMEF18Q5VWM3 479 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 DENND2CQ68D51 928 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 SLC30A10Q6XR72 485 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 EIF1ADQ8N9N8 165 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 BLOC1S4Q9NUP1 217 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 HAO1Q9UJM8 370 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 KRIT1O00522 736 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 AFPP02771 609 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 EPHB2P29323 1055 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 CAP2P40123 477 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 GJA8P48165 433 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 ARHGAP4P98171 946 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 MICALL2Q8IY33 904 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 CYP2W1Q8TAV3 490 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 EPS8L3Q8TE67 593 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 FAM192AQ9GZU8 254 aa16.92■□□□□ 0.3
SEMA3B-214ENST00000619119 NPHP3-ACAD11A0A0J9YXS1 232 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 CCNB1P14635 433 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 INTS8Q75QN2 995 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 ANKLE1Q8NAG6 615 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 AZIN2Q96A70 460 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 SPATA16Q9BXB7 569 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 MAGEA13PA6NCF6 341 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 VHLP40337 213 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 GMPSP49915 693 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 UBAP2Q5T6F2 1119 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 TTI2Q6NXR4 508 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 IQCDQ96DY2 449 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 DYDC2Q96IM9 177 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 TXLNGQ9NUQ3 528 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 KLHL14Q9P2G3 628 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 TMEM59LQ9UK28 342 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 A0A1W2PQJ5 194 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 MYMKA6NI61 221 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 CCDC169A6NNP5 214 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 LCA5LO95447 670 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 MGAT5Q09328 741 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 SETDB1Q15047 1291 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 MIIPQ5JXC2 388 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 NOC2LQ9Y3T9 749 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-214ENST00000619119 GJB6O95452 261 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 PRELPP51888 382 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 PACSIN1Q9BY11 444 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 DENND2DQ9H6A0 471 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 CCDC134Q9H6E4 229 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 PDP2Q9P2J9 529 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 STOML1Q9UBI4 398 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 CYP11B2P19099 503 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 PABPC4Q13310 644 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 TNIP1Q15025 636 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 FAM83AQ86UY5 434 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 EXOC3L1Q86VI1 746 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 ENDOVQ8N8Q3 282 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 ERP27Q96DN0 273 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 CUEDC2Q9H467 287 aa16.9■□□□□ 0.3
SEMA3B-214ENST00000619119 FAM86B1E9PN63 330 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 ZNF76P36508 570 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 AMPD3Q01432 767 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 ARID5AQ03989 594 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 ECHDC2Q86YB7 292 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 SCFD2Q8WU76 684 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 MYLK2Q9H1R3 596 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 VPS33BQ9H267 617 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 GMEB1Q9Y692 573 aa16.89■□□□□ 0.3
SEMA3B-214ENST00000619119 POTEB3A0JP26 581 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 POTECB2RU33 542 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 E9PMD0 336 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 O00370 1275 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 TMED1Q13445 227 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 POTEBQ6S5H4 581 aa16.89■□□□□ 0.29
SEMA3B-214ENST00000619119 PGM2Q96G03 612 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms