RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZMYM2Q9UBW7 1377 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 SPTLC2O15270 562 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 INPPL1O15357 1258 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 TBCAO75347 108 aaKnown RBP17.57■□□□□ 0.4
BRCA1-228ENST00000618469 DDHD2O94830 711 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 YEATS4O95619 227 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 GALTP07902 379 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 ERVFC1P60507 584 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 DCAF4L1Q3SXM0 396 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 NT5DC1Q5TFE4 455 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 TAS1R3Q7RTX0 852 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
BRCA1-228ENST00000618469 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 RPS6KC1Q96S38 1066 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 MRPL4Q9BYD3 311 aaKnown RBP17.57■□□□□ 0.4
BRCA1-228ENST00000618469 TMEM134Q9H6X4 195 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 KLK14Q9P0G3 267 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
BRCA1-228ENST00000618469 STK17AQ9UEE5 414 aa17.57■□□□□ 0.4
BRCA1-228ENST00000618469 RBM19Q9Y4C8 960 aaKnown RBP17.57■□□□□ 0.4
BRCA1-228ENST00000618469 CARNS1A5YM72 827 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 FSCN2O14926 492 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 RECQL4O94761 1208 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 FAM13AO94988 1023 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 SP100P23497 879 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-228ENST00000618469 CA8P35219 290 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 SMTNP53814 917 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 STRN3Q13033 797 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 ZNF568Q3ZCX4 644 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-228ENST00000618469 BMP8AQ7Z5Y6 402 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 FBXL6Q8N531 539 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 IGSF21Q96ID5 467 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
BRCA1-228ENST00000618469 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-228ENST00000618469 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-228ENST00000618469 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-228ENST00000618469 LOC730098B7Z3J9 87 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 K7ENM7 598 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 PER2O15055 1255 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 GLP2RO95838 553 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 GRIK3Q13003 919 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 RRAGBQ5VZM2 374 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 PDE12Q6L8Q7 609 aaKnown RBP17.55■□□□□ 0.4
BRCA1-228ENST00000618469 TMC7Q7Z402 723 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 TMEM161BQ8NDZ6 487 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 ATOH1Q92858 354 aaPredicted RBP17.55■□□□□ 0.4
BRCA1-228ENST00000618469 ACO2Q99798 780 aaKnown RBP17.55■□□□□ 0.4
BRCA1-228ENST00000618469 TARS2Q9BW92 718 aaKnown RBP17.55■□□□□ 0.4
BRCA1-228ENST00000618469 CDT1Q9H211 546 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 ZHX3Q9H4I2 956 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 TLE6Q9H808 572 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 MIOSQ9NXC5 875 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 KCNG1Q9UIX4 513 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 GDAQ9Y2T3 454 aa17.55■□□□□ 0.4
BRCA1-228ENST00000618469 H0Y858 1186 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 PPP6R2O75170 966 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
BRCA1-228ENST00000618469 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
BRCA1-228ENST00000618469 HARSP12081 509 aaKnown RBP17.54■□□□□ 0.4
BRCA1-228ENST00000618469 DDIT3P35638 169 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 STAT6P42226 847 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 OR1G1P47890 313 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 ZNF131P52739 623 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 NCKAP1LP55160 1127 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 DSC1Q08554 894 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 GIT2Q14161 759 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 SMC1AQ14683 1233 aaKnown RBP17.54■□□□□ 0.4
BRCA1-228ENST00000618469 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 COLGALT2Q8IYK4 626 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 VPS52Q8N1B4 723 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 MYCT1Q8N699 235 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 SMRP1Q8NCR6 262 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 GSTCDQ8NEC7 633 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 APOL5Q9BWW9 433 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 ZBP1Q9H171 429 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 NGRNQ9NPE2 291 aaKnown RBP17.54■□□□□ 0.4
BRCA1-228ENST00000618469 ANKFY1Q9P2R3 1169 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 FAN1Q9Y2M0 1017 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 PLXNA3P51805 1871 aa17.54■□□□□ 0.4
BRCA1-228ENST00000618469 ZFHX2Q9C0A1 2572 aaPredicted RBP17.53■□□□□ 0.4
BRCA1-228ENST00000618469 A0A087X0B3 334 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 HIDE1A8MVS5 230 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 H0YCG3 227 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 NRP1O14786 923 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 DYMQ7RTS9 669 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 ZBTB33Q86T24 672 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 PDILTQ8N807 584 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 CEP120Q8N960 986 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 BICD1Q96G01 975 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 NTPCRQ9BSD7 190 aaKnown RBP17.53■□□□□ 0.4
BRCA1-228ENST00000618469 MARCH5Q9NX47 278 aa17.53■□□□□ 0.4
BRCA1-228ENST00000618469 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.52■□□□□ 0.4
BRCA1-228ENST00000618469 PTGESO14684 152 aa17.52■□□□□ 0.4
BRCA1-228ENST00000618469 CUTAO60888 179 aa17.52■□□□□ 0.4
BRCA1-228ENST00000618469 ALDH2P05091 517 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms