RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PGBD4Q96DM1 585 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 SAAL1Q96ER3 474 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 RNPC3Q96LT9 517 aaKnown RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 DUSP9Q99956 384 aaKnown RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 RNF216Q9NWF9 866 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 RWDD2AQ9UIY3 292 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 CPSF3Q9UKF6 684 aaKnown RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 ANK1P16157 1881 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 EXTL3O43909 919 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 CLTAP09496 248 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 ITGA4P13612 1032 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 ERCC5P28715 1186 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 ACOT2P49753 483 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 CYP2J2P51589 502 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 OSTNP61366 133 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 KYAT1Q16773 422 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 CLLU1OSQ5K130 101 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 RNF169Q8NCN4 708 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 SLC9A7Q96T83 725 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 APOL6Q9BWW8 343 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 RECQL4O94761 1208 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 UPP2O95045 317 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 FGFR1P11362 822 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 IBSPP21815 317 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-213ENST00000618217 C11orf57Q6ZUT1 292 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-213ENST00000618217 XXYLT1Q8NBI6 393 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 ACAP3Q96P50 834 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 FAM213AQ9BRX8 229 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 CCDC94Q9BW85 323 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-213ENST00000618217 CXCL16Q9H2A7 254 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 DACH1Q9UI36 760 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 LRFN2Q9ULH4 789 aa24.71■■□□□ 1.55
CBWD3-213ENST00000618217 GOLGA8IPA6NC78 632 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 GOLGA8JA6NMD2 632 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 INPPL1O15357 1258 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 DGKIO75912 1065 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 LDHAP00338 332 aaKnown RBP24.7■■□□□ 1.54
CBWD3-213ENST00000618217 ADRB2P07550 413 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 CCDC192P0DO97 292 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 ATP2A2P16615 1042 aaKnown RBP24.7■■□□□ 1.54
CBWD3-213ENST00000618217 NR2F2P24468 414 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 STX17P56962 302 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 POU5F1Q01860 360 aaKnown RBP24.7■■□□□ 1.54
CBWD3-213ENST00000618217 ENOX2Q16206 610 aaKnown RBP24.7■■□□□ 1.54
CBWD3-213ENST00000618217 SLC10A6Q3KNW5 377 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 ALKAL1Q6UXT8 129 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 CHRDL2Q6WN34 429 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 HERC6Q8IVU3 1022 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 HACE1Q8IYU2 909 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 GPD1LQ8N335 351 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 GSTCDQ8NEC7 633 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 RC3H2Q9HBD1 1191 aaKnown RBP24.7■■□□□ 1.54
CBWD3-213ENST00000618217 GIT1Q9Y2X7 761 aa24.7■■□□□ 1.54
CBWD3-213ENST00000618217 BICDL2A1A5D9 508 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 OFD1O75665 1012 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 GJB5O95377 273 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 AFF1P51825 1210 aaKnown RBP24.69■■□□□ 1.54
CBWD3-213ENST00000618217 XKR4Q5GH76 650 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 LRRC55Q6ZSA7 311 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 CBWD2Q8IUF1 395 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 ZNF689Q96CS4 500 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-213ENST00000618217 TSG101Q99816 390 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 RSAD1Q9HA92 442 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 KIAA1586Q9HCI6 787 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 UBN1Q9NPG3 1134 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 PARP2Q9UGN5 583 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 RALGAPA2Q2PPJ7 1873 aa24.69■■□□□ 1.54
CBWD3-213ENST00000618217 TTC26A0AVF1 554 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 RPL13P26373 211 aaKnown RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 CASP4P49662 377 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 FKBP3Q00688 224 aaKnown RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 ADAM9Q13443 819 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 FAM109BQ6ICB4 259 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 TDHQ8IZJ6 230 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 GZF1Q9H116 711 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 DNAJC25Q9H1X3 360 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 KLK14Q9P0G3 267 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 PDCD11Q14690 1871 aaKnown RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 ARL5CA6NH57 179 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 CXCL8P10145 99 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 GATMP50440 423 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 HTRA4P83105 476 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-213ENST00000618217 FAM117BQ6P1L5 589 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 HELQQ8TDG4 1101 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 GBF1Q92538 1859 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 EEF2KMTQ96G04 330 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 SNX27Q96L92 541 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 ZFP42Q96MM3 310 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 CASD1Q96PB1 797 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 GAD1Q99259 594 aa24.68■■□□□ 1.54
CBWD3-213ENST00000618217 EXOC3O60645 756 aa24.67■■□□□ 1.54
CBWD3-213ENST00000618217 SNRNP35Q16560 246 aaKnown RBP24.67■■□□□ 1.54
CBWD3-213ENST00000618217 ANO6Q4KMQ2 910 aa24.67■■□□□ 1.54
CBWD3-213ENST00000618217 GLB1LQ6UWU2 654 aa24.67■■□□□ 1.54
CBWD3-213ENST00000618217 RPF1Q9H9Y2 349 aaKnown RBP24.67■■□□□ 1.54
CBWD3-213ENST00000618217 PLEKHA5Q9HAU0 1116 aa24.67■■□□□ 1.54
CBWD3-213ENST00000618217 TOPORSQ9NS56 1045 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-213ENST00000618217 MIOSQ9NXC5 875 aa24.67■■□□□ 1.54
CBWD3-213ENST00000618217 ZNF233A6NK53 670 aa24.66■■□□□ 1.54
CBWD3-213ENST00000618217 HOXA2O43364 376 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms