RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 HAPLN2Q9GZV7 340 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 NSUN3Q9H649 340 aaKnown RBP13.64□□□□□ -0.23
DDB2-213ENST00000617847 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 NT5C1B-RDH14C9J2C7 533 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 FSCN2O14926 492 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 COASYQ13057 564 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDB2-213ENST00000617847 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 SLC39A4Q6P5W5 647 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 ZBTB33Q86T24 672 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
DDB2-213ENST00000617847 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
DDB2-213ENST00000617847 RPS6KC1Q96S38 1066 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
DDB2-213ENST00000617847 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 CXCL16Q9H2A7 254 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
DDB2-213ENST00000617847 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
DDB2-213ENST00000617847 CLDN3O15551 220 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 ALDH2P05091 517 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 IRS1P35568 1242 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 LIG4P49917 911 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 CASP5P51878 434 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 NDUFA8P51970 172 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 KRT17Q04695 432 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 EHHADHQ08426 723 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 ALCAMQ13740 583 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 NAB2Q15742 525 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 TCEAL5Q5H9L2 206 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 ALKAL1Q6UXT8 129 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
DDB2-213ENST00000617847 BICD1Q96G01 975 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 FGFBP2Q9BYJ0 223 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 TLR9Q9NR96 1032 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 PUF60Q9UHX1 559 aaKnown RBP13.63□□□□□ -0.23
DDB2-213ENST00000617847 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 REV3LO60673 3130 aa13.63□□□□□ -0.23
DDB2-213ENST00000617847 A0A0B4J269 797 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 NRP1O14786 923 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
DDB2-213ENST00000617847 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
DDB2-213ENST00000617847 FAM189A1O60320 539 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 EFEMP2O95967 443 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 SYKP43405 635 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 ERVFC1P60507 584 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 ASIC1P78348 528 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 COL19A1Q14993 1142 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
DDB2-213ENST00000617847 PDE12Q6L8Q7 609 aaKnown RBP13.62□□□□□ -0.23
DDB2-213ENST00000617847 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 TMEM169Q96HH4 297 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 ACAP3Q96P50 834 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
DDB2-213ENST00000617847 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 ANKRD63C9JTQ0 380 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 GCNT3O95395 438 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 THP07101 528 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 MYBP10242 640 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 CASP1P29466 404 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 AFMP43652 599 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 KCNA1Q09470 495 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 TUSC3Q13454 348 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 CUL4BQ13620 913 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 SNX27Q96L92 541 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 PPP1R10Q96QC0 940 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 PRDM6Q9NQX0 595 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 TOPORSQ9NS56 1045 aaPredicted RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 OGTO15294 1046 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 KLRC4O43908 158 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 HARSP12081 509 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 KCNE1P15382 129 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 YARSP54577 528 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 OSTNP61366 133 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 KYAT1Q16773 422 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 SLFN12LQ6IEE8 588 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 ADGRD2Q7Z7M1 963 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 ACCSQ96QU6 501 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 ZBP1Q9H171 429 aa13.61□□□□□ -0.23
DDB2-213ENST00000617847 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
DDB2-213ENST00000617847 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms