RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 KLRC1P26715 233 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 MAP4P27816 1152 aaKnown RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.674e-6■■□□□ 13.5
CUL4A-212ENST00000617546 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 LRRC43Q8N309 656 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 PPM1NQ8N819 430 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 PALMDQ9NP74 551 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 ZNF212Q9UDV6 495 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 ANTXR2P58335 489 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 OCRLQ01968 901 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 MCPH1Q8NEM0 835 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 DTX3LQ8TDB6 740 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SERPINB13Q9UIV8 391 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 F8VZ95 297 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 H2AFYO75367 372 aaKnown RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SYF2O95926 243 aaKnown RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 MECOMQ03112 1051 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 TMEM47Q9BQJ4 181 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SLC24A2Q9UI40 661 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 ROBO2Q9HCK4 1378 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 GOLGA8SH3BPF8 625 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 MEIS1O00470 390 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 KRT8P05787 483 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 BMP3P12645 472 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 GEMIN4P57678 1058 aaKnown RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 NUP107P57740 925 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 TRIP10Q15642 601 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 MEA1Q16626 185 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 TTC39BQ5VTQ0 682 aaPredicted RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 NSMFQ6X4W1 530 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 METTL13Q8N6R0 699 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 C1orf54Q8WWF1 131 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SLC7A3Q8WY07 619 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 CCT7Q99832 543 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 SCHIP1Q9P0W5 487 aaPredicted RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
CUL4A-212ENST00000617546 ESYT2A0FGR8 921 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 POTEMA6NI47 508 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 LRRIQ4A6NIV6 560 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TM9SF1O15321 606 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 OSBPP22059 807 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 SLC34A1Q06495 639 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 GABPAQ06546 454 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 OLFML2BQ68BL8 750 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ATG9AQ7Z3C6 839 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ISCA1Q9BUE6 129 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 SMYD2Q9NRG4 433 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 YY1P25490 414 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 PSMC1P62191 440 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 GRIN1Q05586 938 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 R3HDM1Q15032 1099 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 NLRP9Q7RTR0 991 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TAB3Q8N5C8 712 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 HEMGNQ9BXL5 484 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 MCM8Q9UJA3 840 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 DTNAQ9Y4J8 743 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 CDY1Q9Y6F8 540 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ZNF200P98182 395 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 WLSQ5T9L3 541 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 STK32AQ8WU08 396 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ADA2Q9NZK5 511 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ZCCHC11Q5TAX3 1644 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 E9PMD0 336 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 DNAJC6O75061 913 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 UBOX5O94941 541 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 KRT75O95678 551 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 SAT1P21673 171 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 PAX7P23759 505 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 CACNA2D1P54289 1103 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 GSTA3Q16772 222 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 ERBB3P21860 1342 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 PSAPP07602 524 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 UBTFL6P0CB48 400 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-212ENST00000617546 GUCY1A2P33402 732 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 TRPC1P48995 793 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 DEFA1P59665 94 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 DEFA3P59666 94 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 RIPK1Q13546 671 aa10.84□□□□□ -0.67
CUL4A-212ENST00000617546 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms