RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 OR9Q1Q8NGQ5 310 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ZHX2Q9Y6X8 837 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ORC4O43929 436 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ESRRBO95718 433 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 INPP5AQ14642 412 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 TMEM179Q6ZVK1 233 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 CDC26Q8NHZ8 85 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SH3RF3Q8TEJ3 882 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 FAM129AQ9BZQ8 928 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PABPC3Q9H361 631 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 NPR1P16066 1061 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 RCOR2Q8IZ40 523 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SYN2Q92777 582 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ZBTB10Q96DT7 871 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 APEX2Q9UBZ4 518 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 AURKCQ9UQB9 309 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 CYP26A1O43174 497 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SEC24DO94855 1032 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PPARGP37231 505 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PRAMEP78395 509 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 KCTD2Q14681 263 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 OR6B3Q8NGW1 331 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 IGDCC4Q8TDY8 1250 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 SERPINB12Q96P63 405 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 FAM193BQ96PV7 902 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PLAGL2Q9UPG8 496 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PNPLA7Q6ZV29 1317 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 C16orf96A6NNT2 1141 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 TMEM253P0C7T8 217 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 PRDX5P30044 214 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 SUSD4Q5VX71 490 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 NAF1Q96HR8 494 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 ADAM33Q9BZ11 813 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 TYW5A2RUC4 315 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 KRT8P05787 483 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 OSBPP22059 807 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MAGEA4P43358 317 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 ACTR2P61160 394 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CAPRIN1Q14444 709 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 PAPD7Q5XG87 772 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 KRT27Q7Z3Y8 459 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 ASPSCR1Q9BZE9 553 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 KIF9Q9HAQ2 790 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 ZNF609O15014 1411 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 SNX2O60749 519 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 P4HBP07237 508 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MTHFD1LQ6UB35 978 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 AGR3Q8TD06 166 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CASKIN2Q8WXE0 1202 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CARD9Q9H257 536 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MARCOQ9UEW3 520 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 PPP1R3GB7ZBB8 358 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CDH6P55285 790 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 ERVK-24P63145 666 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CYFIP1Q7L576 1253 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CATSPER3Q86XQ3 398 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 RNF139Q8WU17 664 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 MTRQ99707 1265 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 CCT7Q99832 543 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 FSD1LQ9BXM9 530 aa11.25□□□□□ -0.61
CLTCL1-209ENST00000617103 SAMD9LQ8IVG5 1584 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 EYA4O95677 639 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SNAP25P60880 206 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 MTMR1Q13613 665 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 LVRNQ6Q4G3 990 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 C16orf89Q6UX73 402 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ALG6Q9Y672 507 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 LAMC1P11047 1609 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 BCORL1Q5H9F3 1711 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SNAP23O00161 211 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms