RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 IQCA1LA6NCM1 817 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 I3L4J1 428 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 RHOBTB3O94955 611 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 CDH8P55286 799 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 SNAPC2Q13487 334 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 METTL23Q86XA0 190 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 ANKRD13AQ8IZ07 590 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 TMEM35BQ8NCS4 154 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 KIAA0895Q8NCT3 520 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 GIMAP8Q8ND71 665 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 KAT5Q92993 513 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 FAF2Q96CS3 445 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 CEP41Q9BYV8 373 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 MTFR1LQ9H019 292 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 KLHL8Q9P2G9 620 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 SIGLEC1Q9BZZ2 1709 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 TSPAN3O60637 253 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 PPFIA2O75334 1257 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 HLA-DRAP01903 254 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 RPSAP08865 295 aaKnown RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 ELF1P32519 619 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 RPS6KA2Q15349 733 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 TTC31Q49AM3 519 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 FYB2Q5VWT5 728 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 MAP7D3Q8IWC1 876 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 SCYL3Q8IZE3 742 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 SPATA4Q8NEY3 305 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 PYROXD1Q8WU10 500 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 SLC20A1Q8WUM9 679 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 JPH2Q9BR39 696 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 POLR3CQ9BUI4 534 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 BCAS3Q9H6U6 928 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 MRPL47Q9HD33 250 aaKnown RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 UBN1Q9NPG3 1134 aa4.05□□□□□ -1.76
LTN1-207ENST00000614971 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 FEZ2Q9UHY8 353 aaPredicted RBP4.05□□□□□ -1.76
LTN1-207ENST00000614971 PHLPP2Q6ZVD8 1323 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 AGRPO00253 132 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 LPXNO60711 386 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 MYL1P05976 194 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 IRF1P10914 325 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 KRT10P13645 584 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 ALDH3A1P30838 453 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 GTF2H1P32780 548 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SOX5P35711 763 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 ACCSLQ4AC99 568 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 TMTC4Q5T4D3 741 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 NUGGCQ68CJ6 796 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 PDXDC1Q6P996 788 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 DEFB128Q7Z7B8 93 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 LRRC43Q8N309 656 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 PPM1NQ8N819 430 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SYTL5Q8TDW5 730 aaPredicted RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 TAS1R2Q8TE23 839 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 PARD3BQ8TEW8 1205 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 MAML1Q92585 1016 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 LPAR1Q92633 364 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 RNPC3Q96LT9 517 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 ACAP3Q96P50 834 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 THAP2Q9H0W7 228 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 AGPAT3Q9NRZ7 376 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 TUBE1Q9UJT0 475 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 TRPA1O75762 1119 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 APRTP07741 180 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 THPOP40225 353 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 OR1G1P47890 313 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 EPHB1P54762 984 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 MAGOHP61326 146 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 NOP14P78316 857 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 PDIA5Q14554 519 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 COBLL1Q53SF7 1204 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 XKR3Q5GH77 459 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SLFN12LQ6IEE8 588 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 CCDC137Q6PK04 289 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 GPRC5AQ8NFJ5 357 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 STMN2Q93045 179 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 MOV10L1Q9BXT6 1211 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 C10orf88Q9H8K7 445 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 TRPC7Q9HCX4 862 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 GPATCH2LQ9NWQ4 482 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 CPSF3Q9UKF6 684 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 PLEKHG2Q9H7P9 1386 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 A0A087WZ62 844 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 DFFAO00273 331 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 B3GAT3O94766 335 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SGPL1O95470 568 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 MMEP08473 750 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 PLS3P13797 630 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 BMP6P22004 513 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 ACAT1P24752 427 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 ZBED8Q8IZ13 594 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 ATP11CQ8NB49 1132 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 C1orf131Q8NDD1 294 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 GANCQ8TET4 914 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 SCFD1Q8WVM8 642 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 HDAC11Q96DB2 347 aa4.04□□□□□ -1.76
LTN1-207ENST00000614971 ELAC2Q9BQ52 826 aaKnown RBP4.04□□□□□ -1.76
LTN1-207ENST00000614971 FDXACB1Q9BRP7 624 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms