RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZSCAN16Q9H4T2 348 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PCIF1Q9H4Z3 704 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 ELAC1Q9H777 363 aaKnown RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CHST12Q9NRB3 414 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 RAPGEFL1Q9UHV5 662 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 ASAP2O43150 1006 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GTPBP6O43824 516 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 EOMESO95936 686 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 EPCAMP16422 314 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 STAT6P42226 847 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PLXNA3P51805 1871 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 ZNF568Q3ZCX4 644 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GLB1LQ6UWU2 654 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TMC7Q7Z402 723 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 LRRC43Q8N309 656 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 IGSF21Q96ID5 467 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TCHPQ9BT92 498 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 UBE2ZQ9H832 354 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 AAASQ9NRG9 546 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 ZDBF2Q9HCK1 2354 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 LAMA1P25391 3075 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 DLL1O00548 723 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TRAK2O60296 914 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PROZP22891 400 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 NOC3LQ8WTT2 800 aaKnown RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 KIFAP3Q92845 792 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 IFT74Q96LB3 600 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CBWD1Q9BRT8 395 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 C11orf84Q9BUA3 381 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 NFKBIZQ9BYH8 718 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 MAPK8IP1Q9UQF2 711 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TIMM13Q9Y5L4 95 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GRXCR2A6NFK2 248 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 C2orf71A6NGG8 1288 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 GAS2O43903 313 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PFKFB1P16118 471 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 POU3F3P20264 500 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ALDH7A1P49419 539 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 NCKAP1LP55160 1127 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 DSC1Q08554 894 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ISM2Q6H9L7 571 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PPP4R3CPQ6ZMV5 832 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZBTB8OSQ8IWT0 167 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 SMYD4Q8IYR2 804 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 AK8Q96MA6 479 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ASB2Q96Q27 587 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ENTPD7Q9NQZ7 604 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PRMT7Q9NVM4 692 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 TBX20Q9UMR3 447 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 SMIM28A0A1B0GU29 152 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 HCRTO43612 131 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 FAM13AO94988 1023 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZNF131P52739 623 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 CRELD2Q6UXH1 353 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 CEP57Q86XR8 500 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 NELFCDQ8IXH7 590 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 HLA-CQ95604 372 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZNF558Q96NG5 402 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 NTPCRQ9BSD7 190 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 NT5C3AQ9H0P0 336 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 RCOR1Q9UKL0 485 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 C2orf16Q68DN1 1984 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PTPRJQ12913 1337 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ACTN4O43707 911 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 RFPL2O75678 378 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 FAM187BQ17R55 369 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 RESP18Q5W5W9 173 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZNF720Q7Z2F6 126 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PALB2Q86YC2 1186 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 CNNM3Q8NE01 707 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 MRPS27Q92552 414 aaKnown RBP6.25□□□□□ -1.41
CPNE3-208ENST00000614678 SPATA32Q96LK8 384 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 TRIM9Q9C026 710 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 PARVGQ9HBI0 331 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 SLC39A2Q9NP94 309 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 THEGQ9P2T0 379 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 HCFC2Q9Y5Z7 792 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 DCHS1Q96JQ0 3298 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 ZMYM2Q9UBW7 1377 aa6.25□□□□□ -1.41
CPNE3-208ENST00000614678 LRRN2O75325 713 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 CXCL14O95715 111 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 ENOX2Q16206 610 aaKnown RBP6.24□□□□□ -1.41
CPNE3-208ENST00000614678 CTC1Q2NKJ3 1217 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 HERC4Q5GLZ8 1057 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-208ENST00000614678 POTEHQ6S545 545 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 ALKAL1Q6UXT8 129 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 FAM178BQ8IXR5 827 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 RDH13Q8NBN7 331 aa6.24□□□□□ -1.41
CPNE3-208ENST00000614678 STKLD1Q8NE28 680 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms