RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 H0Y858 1186 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 C2CD2LO14523 706 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 CD2BP2O95400 341 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 AKAP5P24588 427 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 CCT6AP40227 531 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 DSG1Q02413 1049 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 TMC5Q6UXY8 1006 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 STAMQ92783 540 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 ZFP42Q96MM3 310 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 RXFP1Q9HBX9 757 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 GPRC5CQ9NQ84 441 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 MIOSQ9NXC5 875 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 FNIP2Q9P278 1114 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 LRWD1Q9UFC0 647 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
PDLIM2-218ENST00000614502 TRIP11Q15643 1979 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 ACKR2O00590 384 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 B4GALT5O43286 388 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 GFRA3O60609 400 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 TADA2AO75478 443 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 EFEMP2O95967 443 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 PRKCBP05771 671 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 THP07101 528 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 TUSC3Q13454 348 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 DCAF4L1Q3SXM0 396 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 KIAA0319Q5VV43 1072 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 MAN1C1Q9NR34 630 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 KCNG1Q9UIX4 513 aa13.4□□□□□ -0.26
PDLIM2-218ENST00000614502 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.27
PDLIM2-218ENST00000614502 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 DOCK6Q96HP0 2047 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 A0A087WWV3 80 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 TEX28O15482 410 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 PRPHP41219 470 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 MCM2P49736 904 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 HSP90AA2PQ14568 343 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 CDR2LQ86X02 465 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 GSTCDQ8NEC7 633 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 CITO14578 2027 aa13.39□□□□□ -0.27
PDLIM2-218ENST00000614502 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 PTGDRQ13258 359 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 KLK14Q9P0G3 267 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 IGSF9Q9P2J2 1179 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
PDLIM2-218ENST00000614502 K7ERI5 159 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 LIG1P18858 919 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 NXPE3Q969Y0 559 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 GPR62Q9BZJ7 368 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 MFSD1Q9H3U5 465 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 PIDD1Q9HB75 910 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 WDR6Q9NNW5 1121 aaKnown RBP13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 SNTG2Q9NY99 539 aa13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
PDLIM2-218ENST00000614502 RECQL4O94761 1208 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 PAPLNO95428 1278 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 DMP1Q13316 513 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 TDGQ13569 410 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 ATF7IP2Q5U623 682 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 SMG7Q92540 1137 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 SNX27Q96L92 541 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 UROC1Q96N76 676 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 TOPORSQ9NS56 1045 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-218ENST00000614502 TNFSF13BQ9Y275 285 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms