RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ARID5AQ03989 594 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 LRRC63Q05C16 580 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 ZBTB41Q5SVQ8 909 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 LMBRD2Q68DH5 695 aaPredicted RBP10.73□□□□□ -0.69
GGA3-221ENST00000614198 SLC39A4Q6P5W5 647 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 METTL13Q8N6R0 699 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 TSEN2Q8NCE0 465 aaKnown RBP10.73□□□□□ -0.69
GGA3-221ENST00000614198 TMEM161BQ8NDZ6 487 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 SEPT1Q8WYJ6 367 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 CAVIN3Q969G5 261 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 TINF2Q9BSI4 451 aa10.73□□□□□ -0.69
GGA3-221ENST00000614198 TPX2Q9ULW0 747 aaKnown RBP10.73□□□□□ -0.69
GGA3-221ENST00000614198 ANO9A1A5B4 782 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 KRT86O43790 486 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 TLR2O60603 784 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 RNASE9P60153 205 aaKnown RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 ITIH3Q06033 890 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 ADCY2Q08462 1091 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 IFFO1Q0D2I5 559 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 E2F5Q15329 346 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 OLFML2BQ68BL8 750 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 C17orf99Q6UX52 265 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 MAATS1Q7Z4T9 603 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 PDLIM7Q9NR12 457 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 IGKV6D-21A0A0A0MT36 114 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 LRRIQ4A6NIV6 560 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 LYPLA2O95372 231 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 KCNH2Q12809 1159 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 ODF2Q5BJF6 829 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 CCDC121Q6ZUS5 278 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 TATDN2Q93075 761 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 STRA6Q9BX79 667 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 HAPLN2Q9GZV7 340 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 KMT5AQ9NQR1 393 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 BATF3Q9NR55 127 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 ADGRA2Q96PE1 1338 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 CAND2O75155 1236 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 STAM2O75886 525 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 GLRA2P23416 452 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 NAA25Q14CX7 972 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 XKR3Q5GH77 459 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 ZNF572Q7Z3I7 529 aaPredicted RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 NEK9Q8TD19 979 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 PPANQ9NQ55 473 aaKnown RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 TOPORSQ9NS56 1045 aaPredicted RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 SMARCAL1Q9NZC9 954 aa10.72□□□□□ -0.69
GGA3-221ENST00000614198 LARSQ9P2J5 1176 aaKnown RBP10.72□□□□□ -0.69
GGA3-221ENST00000614198 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 GUCY2FP51841 1108 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 CBWD6Q4V339 395 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 CBWD3Q5JTY5 395 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 CBWD5Q5RIA9 395 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 OTUD6AQ7L8S5 288 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 CBWD2Q8IUF1 395 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 ZNF513Q8N8E2 541 aaPredicted RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 PRPF31Q8WWY3 499 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 CCDC127Q96BQ5 260 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 AZI2Q9H6S1 392 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 SPATS2LQ9NUQ6 558 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 RNF19AQ9NV58 838 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 TYW1Q9NV66 732 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 DMGDHQ9UI17 866 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 TRAF3IP3Q9Y228 551 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 GINS2Q9Y248 185 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.71□□□□□ -0.69
GGA3-221ENST00000614198 CETN3O15182 167 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 MDH1P40925 334 aaKnown RBP10.71□□□□□ -0.69
GGA3-221ENST00000614198 HIC1Q14526 733 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 TAX1BP1Q86VP1 789 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 TRIM59Q8IWR1 403 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 HDAC7Q8WUI4 952 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 ZIM3Q96PE6 472 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 ANKEF1Q9NU02 776 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 SIK3Q9Y2K2 1263 aa10.71□□□□□ -0.69
GGA3-221ENST00000614198 EXOC3O60645 756 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 TRPA1O75762 1119 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 NOL4O94818 638 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 CLSTN1O94985 981 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 IQCF3P0C7M6 154 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 GAP43P17677 238 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 TNFRSF8P28908 595 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 ZNF200P98182 395 aaPredicted RBP10.71□□□□□ -0.7
GGA3-221ENST00000614198 SPA17Q15506 151 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 RHPN2Q8IUC4 686 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms