RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SNX9Q9Y5X1 595 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 FTCDO95954 541 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 ACTN1P12814 892 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CCL23P55773 120 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SP3Q02447 781 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 DGKDQ16760 1214 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 OR6B2Q6IFH4 312 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 C4orf50Q6ZRC1 276 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 PRPF31Q8WWY3 499 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 A0A1B0GTH6 734 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 GMNCA6NCL1 334 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 MANSC4A6NHS7 340 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 INSRRP14616 1297 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CCDC6Q16204 474 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 KNOP1Q1ED39 458 aaKnown RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ACCSLQ4AC99 568 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 PREPLQ4J6C6 727 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 RNF180Q86T96 592 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CYFIP2Q96F07 1278 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 DHTKD1Q96HY7 919 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 FAM167AQ96KS9 214 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 HSD3B7Q9H2F3 369 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CUEDC2Q9H467 287 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 STARD7Q9NQZ5 370 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 F5H423 210 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 H0YCG3 227 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 DNAJB2P25686 324 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ERCC5P28715 1186 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 MDH1P40925 334 aaKnown RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 TAF11Q15544 211 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 TRIML1Q8N9V2 468 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 DNAJB3Q8WWF6 145 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CPB2Q96IY4 423 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ELAC2Q9BQ52 826 aaKnown RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 LACRTQ9GZZ8 138 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ZCWPW1Q9H0M4 648 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ACTR5Q9H9F9 607 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CACNA1GO43497 2377 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 EMSYQ7Z589 1322 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 KCNK3O14649 394 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ADCY3O60266 1144 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 EYA4O95677 639 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ADORA2BP29275 332 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 MAN2A1Q16706 1144 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ZNF667Q5HYK9 610 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 CD99L2Q8TCZ2 262 aa11.58□□□□□ -0.56
FAM3A-221ENST00000612856 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 NHEJ1Q9H9Q4 299 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
FAM3A-221ENST00000612856 A0A087WZ62 844 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 PDE2AO00408 941 aaPredicted RBP11.57□□□□□ -0.56
FAM3A-221ENST00000612856 PGM5Q15124 567 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 PTGISQ16647 500 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 NME8Q8N427 588 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 GIMAP8Q8ND71 665 aaPredicted RBP11.57□□□□□ -0.56
FAM3A-221ENST00000612856 FDXACB1Q9BRP7 624 aaPredicted RBP11.57□□□□□ -0.56
FAM3A-221ENST00000612856 LRRC4Q9HBW1 653 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 NOD2Q9HC29 1040 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 KCNK9Q9NPC2 374 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 XPNPEP3Q9NQH7 507 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 MCM8Q9UJA3 840 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 PFASO15067 1338 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 TISP43B9A030 160 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 EVI5O60447 810 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 FGRP09769 529 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 PMS1P54277 932 aaKnown RBP11.57□□□□□ -0.56
FAM3A-221ENST00000612856 ATP11AP98196 1134 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 TBX2Q13207 712 aaPredicted RBP11.57□□□□□ -0.56
FAM3A-221ENST00000612856 NOGQ13253 232 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 LMBR1Q8WVP7 490 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 AGAP1Q9UPQ3 857 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 H0Y3Z8 333 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 DGAT1O75907 488 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 H2AFZP0C0S5 128 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 WEE2P0C1S8 567 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 OR1G1P47890 313 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 ITKQ08881 620 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 TRIM14Q14142 442 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 CASC4Q6P4E1 433 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms